| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2601 |
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| Symbol | |
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| ID | 5870390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2919551 |
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| End bp | 2922598 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547724 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668836 |
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| Protein GI | 167033605 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG0739] Membrane proteins related to metalloendopeptidases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.338016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0406059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC TTTCCCACCC GGCACCTCGG TTTTCGGCAA GCGATGCAGA GGGCCTTGCA
AAAGATTTCT TCAATGTCAC CGGCATTGCA ACGCCCCTGG ACGGGGAGCG TGATTGCAAC
TACCGGCTGA AGACGGGCAT GGATGCAGGC TGGATCCTGA AAATCGTCAA TGCCAGCGAG
CCCAGGGTAG AAAGCGAGTT TCAAACCGCG CTGCTCGATC ACCTGGCCGT GCATGGCGCG
CACTTGGGCG TGCCTCACCT GCGGGCCAGC GTGGCGGGCG ATTACCTACC GACGGTGACC
AGCGCCACAG GAGAACAGCA CGCGGTGCGC CTGGTCAGCT GGTTGGCCGG CACGCCGCTC
GCCGAGGCCA GGCGCTCCTT TGCGCTGATG AGAAACTTCG GCCAGGCACT CGGTGAGCTT
GACCGCGCCC TGCAGGGCTT CATGCACCCG GGCGCCGTTC GTGAACTGGA CTGGGACCTG
CGCCATGCGG CGCGCGCTCG ATCACGCCTG CACTGCATCA AGAGCCCCGA GCGGCGGGCC
ATTGCCGAAC GTTTCATCAC CCAGTTCGAA CAGAATGTCC AGCCCAGGCT GGCTTCACTT
CGCGCCCAGG TGATCCACAA CGACGCCAAC GACTGGAACA TTCTGGTCGA TGCCGAATCC
ACCAGCAACG TGACTGGCTT CATCGACTTT GGCGACGCAG TGCATAGCGT GCTGATTGCC
GAAGTCGCGA TCGCCAGCGC TTACGCCATT CTCGACATGG ACGACCCGAT CGGCGCTGCT
GCTGCGCTGG TGGCCGGCTT CCATGACAAG TACCCGTTGC AAGCGCAAGA GCTGGATGTG
CTATTCAACC TGATTGCCAT GCGCCTGGTC ATCAGCGTCA CGTTTTCTGC TTCGCGGCAC
GATCAGGCAG GCGACAATCC CTACCTGGCG ATCAGCGAAG CCCCTGCCTG GCGCCTGCTG
GAACAGCTTG ATGCGATGAA CCCACGGCTG GCCACTGGCA TCCTGCGCAA GGCCTGTGGT
TTCGATGCCA TCGACGGTGC CGGGGAAATC CGCCGCTGGA TTGCGGATAA CCACAAAGCG
TTCGCCGACC TGGTACACCC TTCAGCCGCC ATCCTCAACA AAGTGATCGC GCCGTTTGGC
GACGCCAGCC ACGAAATGAC CATCGCTTCG GCCGAGCAAC GTCCTGCAGA TGCGACCCGC
TGGTGGGACG CGTACTCTGC CGCGCACAAG GTGCCGCTGG CCATCGGGCC ATGGGGCGAG
TTGCGCACCA TCTATACCGA CAGTGCTTTT GAGTCCCGTT TCATCAAGGG GCAGCGCCGC
ACCTTGCATG TGGGTGTCGA CCTGGTGATG CCGGCGGGTA CGCCTTTGTA CGCACCGATC
GCCGGCACCG TCAGAAGCGT CGAGATAGAA CCAGACCCGC TTGGGTATGG TGGCCTGGTG
ATGATCGAGC ACGCACCGAC AGGTTGCCCG CCATTTCTGA CCTTGTGGGG GCACATGGCC
CATGAGGCGC TCGGCCGCTT GAAAGCCGGT GACAAGCTAG AGGCTGGCGA CCTGGTCGGT
TACATGGGCA CCGACCATGA AAATGGCGGC TGGATCCCCC ACCTGCATCT GCAGATGGCC
ACCGATACCC AGCTGACCGC GAGCGAGGTC ATTGGCGTTG GTGAGCCAGA GTACCGTGAC
GTGTGGGCTG ACTTGTTCCC TGATGCCTCG ATGTTGGCCG GCATTCCGCC AGAGACCTAC
GACCAGCAGG GCATGACCAA GGCCCAGATC ATTGCCAAGC GCAAGGAGTT GCTGCTACCG
AACCTGTCAA TTTCGTACAC TGACCCGATC AAGTTCGTGC GTGGCGATGG CGTATGGCTG
ATCGACAACT TCGGGCGGGC CTACCTGGAC TGCTTCAATA ACGTCTGCCA CCTGGGCCAT
AGCCATCCCG ATGTGGTCGA AGCCTTGACC CGTCAGGCTG CGCGACTGAA CACCAATACC
CGCTACCTTC ATGACAACAT CGTCGAATAC GCCGAACGCC TGACCGGCAC CTTGCCAGAG
GGGCTTTGCG TCGCGTCCTT TGGTTGTTCG GGCAGTGAAG CCAACAGTTT GATGCTGCGC
ATGGCGCGCA ACTACACAGG CAGTGACCAG GCAATCGTGC TGGACTGGGC CTACCACGGC
ACCACCCAGG AGCTCATTGA CCTGAGCCCA TACAAGTACA AGCGCAAGGC CGGCAAAGGC
AGGGCGGCGC ATGTTTACGA GGCGGTGGTC CCGGACAGCT ACTACGCGCC CGAGCATTGG
CCAGTGGAAG AGCACGGCAA GCGCTTTGCC GAGTCGGTAG CAGAGCAACT GGATGCCATG
CGCAAGGCAG GCAAGAAGCC CGCTTTTTTC CTTGCCGAGT CGATTCCCAG CGTGGCGGGG
CAGGTGTTCC TGCCCGAACA CTACCTGCAG GAGGTATACG CCATGGTGCG CGCCGAAGGT
GGGCTGTGCC TGGCCGATGA GGTACAGGTC GGGTTTGGCC GTGTGGGCAG CCACTGGTGG
GCATTCGAGA CTCAGGGCGT AGTGCCGGAT GCTGTCACCA TGGGCAAGCC GATCGGTAAC
GGCCACCCGA TGTCGGCGGT CGTGACCACG CGCGAGGTTG CCGATGCCTT CAACAACGGC
ATGGAGTATT TCAATACCTT CGCCGGCAAC CCCGTGTCGT GCGCGGTAGG CCTGGCAGTG
CTCGATGCGA TCGAGCGCGA CCAGTTGAAG GAAAATGCCT TGAACGTTGG CAATTACCTG
CTCGATGGTT TCCGCAAGCT GCAGCAGCAA TTTGATGTGA TTGGTGATGT GCGCGGCCTG
GGCCTGTTCC TCGGCATTGT GCTGGTCACT GACCGTCAGT CGAAGGTGCC GGCCACGGCC
TTGGCCAGGA AAGTAGCCGA CGGCGCCAGG GAGCGCGGCG TGTTGATCGG CACCGAGGGC
CCGCATGACA ATGTGTTGAA AATGCGGCCT TCAATGATTT TCAGCCGGGC CAATGCCGAT
TTCCTGCTCG AGGTGCTGAA AGACAGCTTC ATCGCAGCGC TGAAATAG
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| Protein sequence | MTDLSHPAPR FSASDAEGLA KDFFNVTGIA TPLDGERDCN YRLKTGMDAG WILKIVNASE
PRVESEFQTA LLDHLAVHGA HLGVPHLRAS VAGDYLPTVT SATGEQHAVR LVSWLAGTPL
AEARRSFALM RNFGQALGEL DRALQGFMHP GAVRELDWDL RHAARARSRL HCIKSPERRA
IAERFITQFE QNVQPRLASL RAQVIHNDAN DWNILVDAES TSNVTGFIDF GDAVHSVLIA
EVAIASAYAI LDMDDPIGAA AALVAGFHDK YPLQAQELDV LFNLIAMRLV ISVTFSASRH
DQAGDNPYLA ISEAPAWRLL EQLDAMNPRL ATGILRKACG FDAIDGAGEI RRWIADNHKA
FADLVHPSAA ILNKVIAPFG DASHEMTIAS AEQRPADATR WWDAYSAAHK VPLAIGPWGE
LRTIYTDSAF ESRFIKGQRR TLHVGVDLVM PAGTPLYAPI AGTVRSVEIE PDPLGYGGLV
MIEHAPTGCP PFLTLWGHMA HEALGRLKAG DKLEAGDLVG YMGTDHENGG WIPHLHLQMA
TDTQLTASEV IGVGEPEYRD VWADLFPDAS MLAGIPPETY DQQGMTKAQI IAKRKELLLP
NLSISYTDPI KFVRGDGVWL IDNFGRAYLD CFNNVCHLGH SHPDVVEALT RQAARLNTNT
RYLHDNIVEY AERLTGTLPE GLCVASFGCS GSEANSLMLR MARNYTGSDQ AIVLDWAYHG
TTQELIDLSP YKYKRKAGKG RAAHVYEAVV PDSYYAPEHW PVEEHGKRFA ESVAEQLDAM
RKAGKKPAFF LAESIPSVAG QVFLPEHYLQ EVYAMVRAEG GLCLADEVQV GFGRVGSHWW
AFETQGVVPD AVTMGKPIGN GHPMSAVVTT REVADAFNNG MEYFNTFAGN PVSCAVGLAV
LDAIERDQLK ENALNVGNYL LDGFRKLQQQ FDVIGDVRGL GLFLGIVLVT DRQSKVPATA
LARKVADGAR ERGVLIGTEG PHDNVLKMRP SMIFSRANAD FLLEVLKDSF IAALK
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