| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2565 |
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| Symbol | |
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| ID | 5870354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2881364 |
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| End bp | 2882143 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547688 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001668800 |
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| Protein GI | 167033569 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.743333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.137463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCGA ACCCCGTTTC CATCAGCCTT TCCAGCTACG GTGCCGACTT TGTGCGGCAA
CGTGGCCAAG AGCAGTTCCT GGACTTGCTG GCAGCCGCTG GCGTTAGCCG AGTGGAATTG
CGCGAAGAAC TGTTCGCCAG TGCACCTGAC GCATCCGCCC TGGGTGCGGT CATTGCCGCA
TTGCACCTGG AGTGCCTGTA TTCGACACCC CTTGAACTGT GGACCACGCA AGGCATGCCC
GATCCACTCC TGGTCCACAA GCTCGAAATC GCCCGAGCGG TTGGCGCGGT GGCGCTGAAG
GTTTCACTGG GCCATTTCAA TGAGCGCTGC GATATGGCGG TGCTGGCGGC ACTGCTGCCG
GCACATGGGC CGCTGCTGCT GGTTGAAAAC GATCAGACCA CCCAAGGAGG CAGGATCGAA
CCCCTGGTGG AGTTTTTCCA GAATGCCGAG CAGTTACGGC TGCGCCTGGG GATGACGTTC
GATATCGGTA ACTGGCAGTG GCAGGGTGAG GCTGCGGGGC AAGCCGCACG GCAACTTGGC
CGTTGGGTGC AGTACGTGCA CTGCAAGGCT GTGCAGCGCC GGGCCGATGG CCGCCTGGTT
GCCATACCGC CCCAGGCGGC GGACCTACAC GAGTGGGCAA CGCTGCTGGC CGAGTTCGCG
CCTGGCGTGG TACGCGCCGT CGAGTACCCC TTGGTTGGCG AAGACCTGCT GGCGCTGACC
CGCGCCCAGG TGCGTAGCCT GTCTGCGCTG GGCGCGGAGC AGGAGGTGGC CCATGCATGA
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| Protein sequence | MHPNPVSISL SSYGADFVRQ RGQEQFLDLL AAAGVSRVEL REELFASAPD ASALGAVIAA
LHLECLYSTP LELWTTQGMP DPLLVHKLEI ARAVGAVALK VSLGHFNERC DMAVLAALLP
AHGPLLLVEN DQTTQGGRIE PLVEFFQNAE QLRLRLGMTF DIGNWQWQGE AAGQAARQLG
RWVQYVHCKA VQRRADGRLV AIPPQAADLH EWATLLAEFA PGVVRAVEYP LVGEDLLALT
RAQVRSLSAL GAEQEVAHA
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