| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2523 |
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| Symbol | |
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| ID | 5870312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2834756 |
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| End bp | 2836108 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547646 |
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| Product | gluconate transporter |
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| Protein accession | YP_001668758 |
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| Protein GI | 167033527 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.365618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0854776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGAC TGGCTACTGA TACCTTCCTG CTGCTCGACG CGCTGGTTAC CATCGTCGGG
CTGATCCTGC TGATCACCCA CTTCAAGGTC CACCCCTTCG TCGCCCTCAC CCTCGCGGCC
GGCTTCCTTG GCTTGACCTC CGGCATGCCC GTGGCCAAGG TCATGAAATC GTTCCAGGAC
GGCTTTGGCG GCGTGCTCGG CTTTGTCGGT ATCGTGCTCG CCCTGGGCAC CATGCTCGGC
AAGCTGATGG CCGACTCCGG GGGCGCCGAC CAGATCGCGC AAACCCTCAT CCGCGCCTTC
GGCAAGAAGA ACGTGCATTG GGCGATGATG TTTGCCGCGT TCCTGGTGGG CATCCCGCTG
TTCTTCGAAA TCGGCTTCGT GCTGCTGATC CCACTGGTGT TCATCGTCGC CAGGCGCTCC
GGGGTGTCGC TGGTGAAAAT CGGCATTCCG CTACTGGCCG GCCTGTCGGT TGTGCACGGC
CTGGTGCCGC CGCACCCAGG CCCATTGCTG GCGATCGGCA TTTTCCACGC CGATATCGGC
AAAACCATCT TCTATGGCCT GATCGTTGCG TTGCCCACCG CGATCATCGC CGGTCCGCTG
TTCGGTAACT TCATTTCCCG CTACATACCG GGTAACCCGT CGCAGGAGCT GATGGACCAG
ATCGCCAAGG AGTCCGACCA GGGCAACCTG CCAAGCTTCA GCATCACCCT GATCACCGTA
CTGCTGCCGG TGGCGCTGAT GTTGCTGAAA ACCTTTGCCG ACGTGGTGCT ACCCGCCGAG
CACATCGTGC GCCAGTGGAT GGACCTGATC GGCCACCCGA TCACCGCCCT GCTCGCCGCC
CTGCTGCTGG CCTTCTATAC CTTCGGCTCA GCCCGCGGTT TCAACCGCCA GCAGATCATG
AAAATGCTCG ACCAGAGCCT GGCACCGACC GCCGCCATCG TACTGATCGT AGGCGCTGGC
GGTGGGTTCA AGCAGATGCT GGTGGACACC GGCGTGGGCA ATGTAATCGG GCAAATGGCC
GTGCAGGCAG AAATTTCACC GATCATGCTG GCTTGGCTGG TAGCCGCGGT GATCCGCATC
GCCACAGGCT CCGCTACCGT CGCCACCATC ACCGGTGCAG GTATCGTCGC ACCGGTGATC
GACCTGGTAC CTGGGGTGAA CCGTGAGCTG TTGGTACTGG CTACCGGTGC TGGCTCGCTG
ATTTTGTCGC ATGTGAACGA CGCCGGCTTC TGGCTGGTGA AGCAATACTT CAACATGACC
GTGGCAGAAA CCTTCAAGAC CTGGAGCATG ATGGAGACGA TCCTGTCCAT CGTCGGCATC
ATCTTCATCA TGTTGCTGTC GCTGGTGGTG TAA
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| Protein sequence | MFGLATDTFL LLDALVTIVG LILLITHFKV HPFVALTLAA GFLGLTSGMP VAKVMKSFQD
GFGGVLGFVG IVLALGTMLG KLMADSGGAD QIAQTLIRAF GKKNVHWAMM FAAFLVGIPL
FFEIGFVLLI PLVFIVARRS GVSLVKIGIP LLAGLSVVHG LVPPHPGPLL AIGIFHADIG
KTIFYGLIVA LPTAIIAGPL FGNFISRYIP GNPSQELMDQ IAKESDQGNL PSFSITLITV
LLPVALMLLK TFADVVLPAE HIVRQWMDLI GHPITALLAA LLLAFYTFGS ARGFNRQQIM
KMLDQSLAPT AAIVLIVGAG GGFKQMLVDT GVGNVIGQMA VQAEISPIML AWLVAAVIRI
ATGSATVATI TGAGIVAPVI DLVPGVNREL LVLATGAGSL ILSHVNDAGF WLVKQYFNMT
VAETFKTWSM METILSIVGI IFIMLLSLVV
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