| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2501 |
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| Symbol | |
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| ID | 5870290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2806028 |
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| End bp | 2807614 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547624 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001668736 |
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| Protein GI | 167033505 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0965221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCA CCACCAAACG CCGCGCCGCG CTCAGCTGGC GTACCCTGTT GCCCTGGGTC
GTCGGCGTAC TGCCGGTAAT GTGCGGCCTG GGCGTGATGA ACTGGCAGAT CGAGCGCGAA
ATGCAAGCCA GTAGCCAGGC CACCACCCGG CAGGCGGTGG AGCACGTCGA GCGCATCCTC
GACAACCTGT CCGCTGCTGC CAATGCGCTG CTGCCCCTGG CTGGCAGCGC TTGCGATCAA
GCCCAGCTCA CGTTGCGGGC CCAGGTTACC CGCAATGCCT TCGTGCGCTC GACCAACCTG
TTCAGGCACA ACAACCTTTA TTGCACCTCG TTGTTCGGCG AGTTCGAGGA ACCGGTCAAT
GCAGCCGACT ACGTAGACGG CAAGCTATGG CTGATGGACG GCAATTCGGT TACGCCTGGC
CACCCGCTAC TGGTATACCG TGCCAGCGAT GGTGACCACG GTGCAATCAC CACGGTGGAT
GGCGACCACC TGCTGACGGC ATTGCGCCTG ATCGGCCCCG ATGAAGAACT GCAAATCCGC
GTCGGCGACG CCTGGATGGG CAAAGACGGA GTGGTGCACA AAGGCGTACC ACCTGCCGCC
TCCAGCGCCA ACGTGTTGCT AGGCTCCACG CGATACCCGT TTAGCGTGCA GGGCGGCTAC
AGCGCCAACA AGCAAGGCCA ACTGTTACGC AGCCACTACC CGGCCCTGCT CAGCCTGCTG
CTGGTGCTGG GGGTTGTGGC GGCGCTGGCA TGCCGCTGGC AGATTCGTCG CGTCACCTCC
CCCCGTGCCG AACTGGATCG CGCCCTGCAG GCCGATGAGT TTCTGCCGTA CTTCCAGCCG
GTGGTACGCA AAGGCGATTA CCGCTGGGCC GGCGCCGAAG TGCTGATGCG CTGGAATCAT
CCACGAGAAG GCCTGGTTCG CCCTGACCTG TTCATCCCAT ATGCAGAACA CAGCGGGCAG
ATTGTCGCCA TGACCCGGGC GCTGATGACG CATACCGCGC AAAGCCTGGC ACCTTATGCC
GGGCTGATGG AGGACGGCTT TCATGTTGGT ATCAACATCA CCGCGGACCA TTGCCGCGAT
CTCAGGTTGC TGGATGACTG CCGTACGTTC CTGCAACACT TTCCGCCCGG CCGGGTGGTA
CTCACCCTGG AGCTGACCGA GCGCAAACTG ATCGAACCCA CGCCCGTGGC CCTCGAACTG
TTCGAAAAAC TGCATGCCAT GGGCGTAATG ATTGCCCTCG ACGACTTCGG CACCGGCCAG
TCGAGCCTCA ACTACCTTCG GCAATTCAAG GTCGACTACC TGAAGATCGA CCAGAGTTTC
GTCGCCATGA TAGGTGCCGA TGCGCTGTCG GTGCACATTC TCGAAAGCAT CATCGAGCTG
TCGGCCAAGC TGGGCCTGGG CATCGTAGCC GAGGGTGTCG AAACCGACAT TCAGCGCGAC
TACCTGGCCG AGCATGGGGT GGACTTCCAG CAGGGTTACC TGTTCGCCAG GCCCATGCCA
GCTGCCCAGT TCCTTGAAGC CCTGGCCACA CGCCCGGGCG CTGCGCAGTT GCCGCAAGGC
GCTGCCCCTG AGATCATGCG CGGCTGA
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| Protein sequence | MPLTTKRRAA LSWRTLLPWV VGVLPVMCGL GVMNWQIERE MQASSQATTR QAVEHVERIL
DNLSAAANAL LPLAGSACDQ AQLTLRAQVT RNAFVRSTNL FRHNNLYCTS LFGEFEEPVN
AADYVDGKLW LMDGNSVTPG HPLLVYRASD GDHGAITTVD GDHLLTALRL IGPDEELQIR
VGDAWMGKDG VVHKGVPPAA SSANVLLGST RYPFSVQGGY SANKQGQLLR SHYPALLSLL
LVLGVVAALA CRWQIRRVTS PRAELDRALQ ADEFLPYFQP VVRKGDYRWA GAEVLMRWNH
PREGLVRPDL FIPYAEHSGQ IVAMTRALMT HTAQSLAPYA GLMEDGFHVG INITADHCRD
LRLLDDCRTF LQHFPPGRVV LTLELTERKL IEPTPVALEL FEKLHAMGVM IALDDFGTGQ
SSLNYLRQFK VDYLKIDQSF VAMIGADALS VHILESIIEL SAKLGLGIVA EGVETDIQRD
YLAEHGVDFQ QGYLFARPMP AAQFLEALAT RPGAAQLPQG AAPEIMRG
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