Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2462 |
Symbol | |
ID | 5870251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2755069 |
End bp | 2755596 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641547585 |
Product | hypothetical protein |
Protein accession | YP_001668697 |
Protein GI | 167033466 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.871251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCT CTTCGCTGAA TGGTAAGGCC CAAAGCGGCT TCACCTACCT GGGCGTGCTG CTGCTGATTG CGGTCAGCAG CGTGGCCCTG GCCGCTACCG GCACGATCTG GGCCAGCGCC GCCCAGCGTG ACCGCGAACG CCAACTGCTG TGGGTGGGCA GCCAGTACGC CCAGGCCTTG CGCAGCTACT ATCGCGCCTC GCCGGGTTTG GCCCAGTACC CGCAGGACTT GGCCGACCTG TTGCAGGACA ACCGTTTCCC CCAGGCCAGG CGGCACATTC GCAGGCTGTA CCCCGACCCC ATCACCAACA GCGACGAGTG GGGCCTGCTG CGCTCGATCG ACGGCCGCAT CACCGGCGTG CACAGCCGTT CGGACGCCAC CCCATTCAAA CGCAGTGGCT TCAGCGCCGA ATGGACAGGC TTCGAGGGGT TGGAGCATTA CAGCGACTGG CAGTTCGTCG CCGAGCAGGC CTTCAGCGAA AGTGCCGGCG GTGTGCAGAC CCACAGCGGC CCGGGAGACA CGCCATGA
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Protein sequence | MAASSLNGKA QSGFTYLGVL LLIAVSSVAL AATGTIWASA AQRDRERQLL WVGSQYAQAL RSYYRASPGL AQYPQDLADL LQDNRFPQAR RHIRRLYPDP ITNSDEWGLL RSIDGRITGV HSRSDATPFK RSGFSAEWTG FEGLEHYSDW QFVAEQAFSE SAGGVQTHSG PGDTP
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