| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2377 |
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| Symbol | |
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| ID | 5870166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2660534 |
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| End bp | 2662600 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641547501 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001668613 |
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| Protein GI | 167033382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCC GCGACCTGCT CTCCCTGCGT CAACAAGTCG AAGCTCTGCA ACGGCAGAAC
GCACTATTGG AAGCACGTCT TGCCAGCCTT CAAGACCATG ATCAGGGCTT TTACCGGTCG
TTGTTCGACA CCATGGACGA AGGCTTTTGC ATCATCGAAT TCTTCGACGG CCCGCACGGT
CCGTTGAGTG ACTATGTGCA TGTGCTGGCC AACGCGGCCT ACGCCAAGCA CGCCGGTATT
CCCAACGTGG TCGGGCAGAA GCTGCGCGAG ATGGTGCCTG ACGAGGCCGA TGACTGGGTG
GCGCGCTATG GCGCTGTACT TCGTACCGGC GCCCCCCTGC ACTTCGAGCA GGAGCTGGTC
GCCACCGGCC ATGTGCTATC AGTGACCACT TTTCGCGTAG AGCCAGCCGA AAAGCGTCAG
GTAGCCGTGT TGTTCAAGGA CGTGACCGAA CGCCGGCGTG CGGAGCAAGC CCTGCAGCGC
CTGAACGAAG AGCTCGAGCA ACGCGTGAAC ACGGCACTGG CAGAGCGACG CTTGTTTGCA
GAGTTGGTCG ACCACAGTGT GGTCAATGTG CATGTGCTCG ACAACGACAT GCGCTGGCTG
GCCATCAACC GCCAGGCCAA GCTTGATTTC CAGCTGCTGT TTGGGAAAAC CCCGGAAATC
GGCGATTGCC TGACAGATCT GATAGATGAT GGGCTTCACG GTCAGGCGCT GAACCTGTCC
TTGTGGAAGC GCGCCCTGGC GGGTGAGCAG TTCGTAGAAG TCGGCACCTT CGGCAAGGAG
CCCCTGGCGC GCCATTACGA GCTGCGCTTC AACGCCCTGC GCGACCATGA AGGAGAAATA
CAAGGGGCCT TTCTGTTCGC CTACGACATC ACTGAGCGGG TGCAAGAGCA GGATCGCTTG
GCCAAGGCCG AAGAAGCCCT TCGTCAAGCG CAGAAGATGG AAGCCGTGGG CCAGCTCAGC
GGCGGCATCG CCCACGACTT CAACAACTTG CTGGGCGGCA TACTCGGCGC TCAGGAACTG
ATGCGCCAAC GCCTGGACCA ATCACGCTTC GACGCCCTGG AGCCGTTGCT GGAGCTGTCC
AGCGGCTCGG CGCAGCTGGC CTCTTCGCTG GTGCACCGGC TGCTGGCGTT CTCCCGCCAG
CAGACCCTGC AACCCTGCTC CACGCAGGTG GCCACATTGG TGGCCGGCAT GGAAGAGTTG
CTGCGCCGCA CCATAGGCCC GGAAATTACC CTGAACAGCC AGTTCGCCAG CCAGCTGTGG
CCGACCTTCA TCGACCCGCC ACAACTGGAA AGTGCCCTGC TCAACATTTG CATCAACGCC
CGCGACGCAA TGCCTGCGGG TGGTTTGATC GACATCATCG GCGACAACCT GCAAATTGAC
GAAGCGCAGG CCCAGGCATT GGAGATACCT GCCGGCGAGT ACGTGCGGCT AAGCATCGTC
GACAACGGTA AAGGCATGTC GGCCGAAGTG GCGGAGCGCG CAGTCGACCC GTTTTTCACC
ACAAAACCTA TCGGCCAGGG CACCGGCCTG GGATTGTCGA TGACTTACGG CTTCGTGCGC
CAATCGGGAG GGCAATTGCG CGTGTTGTCC GTACTTGGTG AAGGTACACG AATCGAGCTG
CTGTTCCCAC GACACCATGA GCAACCCAAA GCCCCAGCGC CCAAGGCCCG CGACACGCGA
CTTGAAAAAA GCAGCACGGC GGCACGGCGA ATCCTGCTGA TCGAGGACCA GGCGGCCTTG
CGCATGGTGG TCGGCGAAGT GCTGGAGGAG CTGGGCTACC AGGTGGACGC TTTCGAGAAT
GGCCCGACTG CCCTCGCGCA CCTGCAACGT GGCGAACGGC CAGACCTGCT GCTGAGTGAT
ATCGGCCTGC CGGGCGGCCT GAATGGTCGC CAGGTGGCCG AACGCTGCCG TGAGCGCTAC
CCAGACATCA AAGTGTTGTT CATCACTGGC TACGACGAAA GCGCGGCGCT CAGCGACGGC
CAGTTGCTGC AAGGTACATT GGTGCTGACC AAGCCGTTCG AGCTGGAAGT GCTGGCCGAG
CGGGTACGAG AACTGCTGGA GGATTGA
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| Protein sequence | MPSRDLLSLR QQVEALQRQN ALLEARLASL QDHDQGFYRS LFDTMDEGFC IIEFFDGPHG
PLSDYVHVLA NAAYAKHAGI PNVVGQKLRE MVPDEADDWV ARYGAVLRTG APLHFEQELV
ATGHVLSVTT FRVEPAEKRQ VAVLFKDVTE RRRAEQALQR LNEELEQRVN TALAERRLFA
ELVDHSVVNV HVLDNDMRWL AINRQAKLDF QLLFGKTPEI GDCLTDLIDD GLHGQALNLS
LWKRALAGEQ FVEVGTFGKE PLARHYELRF NALRDHEGEI QGAFLFAYDI TERVQEQDRL
AKAEEALRQA QKMEAVGQLS GGIAHDFNNL LGGILGAQEL MRQRLDQSRF DALEPLLELS
SGSAQLASSL VHRLLAFSRQ QTLQPCSTQV ATLVAGMEEL LRRTIGPEIT LNSQFASQLW
PTFIDPPQLE SALLNICINA RDAMPAGGLI DIIGDNLQID EAQAQALEIP AGEYVRLSIV
DNGKGMSAEV AERAVDPFFT TKPIGQGTGL GLSMTYGFVR QSGGQLRVLS VLGEGTRIEL
LFPRHHEQPK APAPKARDTR LEKSSTAARR ILLIEDQAAL RMVVGEVLEE LGYQVDAFEN
GPTALAHLQR GERPDLLLSD IGLPGGLNGR QVAERCRERY PDIKVLFITG YDESAALSDG
QLLQGTLVLT KPFELEVLAE RVRELLED
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