| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2365 |
|---|
| Symbol | |
|---|
| ID | 5870154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2644867 |
|---|
| End bp | 2647011 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641547489 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001668601 |
|---|
| Protein GI | 167033370 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTGC GACAACTTTC CATCCAGTGG AAGATCACCC TGCTCGCCGG TCTCTGCCTG
GCCGGCATCG TCACCTTGCT CGTCGGCCTG TCGCTGTACC GCATGGACCA CAGCTCGGAC
CTGGTCAAGG CCAGCAGCAT GCAGATGCTG ACCGAGGCGG CGCAGTCGCG TATCGAGTCG
CAGGGTGAAG TGCAGGCGCT GAACATCCGC CGCCAGTTCA TGGATGCCTA CCAGTACGGC
GCCGGCTTCG CCCGCCAGGT GCTGTTCCTG CGCGAGCAGG CCGAAAAGCG CTTTCTCGAT
GCCTTCGACC TGCGCGAGGA CATGACCCGT CAGGTACGCG CCGCGCTACA GGCCAACCCC
GACCTCCTCG GCCTGTCGCT GGTGTTCGAG CCCAACGCCC TGGACAGCAA GGACAGCCTG
TTCGCCGGCA AGGCAGAGCT GGGCAGCAAC GAAACCGGTC GCTTTGCCCT GTACTGGTCG
CAGCCGCGTG CCGGCCAGCT GACCGCCATG GCGCTGCCTG AGCATGACAT GGCCAACACC
GAGATCGGCC CCAGCGGCCA GCCAGCCAAC ACCTGGTGGG TATGCCCGCG CACGACCGGC
AAGGTGTGCG TGGTAGAACC CTACTTCTAT GACATCGACG GCCAGCAGGT GCTGATGACC
AGCATCGTCT TCCCGCTGGC GGTCAACGGC AAGATCATTG CCACCCTGTC CATCGACATC
AACCTCAACA GCCTGCAGGC ACTGAGCCAG GAGGCCAGCC GCAGCCTCTA CGAAGGCCGC
ACCACGGTCG GCATACTCAG CCCGGTCGGC CTGCTGGCGG GCTACAGCGC CGATGCCAGC
AAGCTGGCCC AGCGCTTCGA CCAGGTAGAC CCGGCCAAGG GCGCCGAACT GGTAGGCAAA
CTGGCCAATG GCAAGATGAC TATCCTCCAC GACCAGCAGC GTTTGAAGGT GCTGGCGGCC
TTCCGGCCGA TCCCCGACGC ACAACCTTGG GGCGTGTTGC TGGATGTACC GGAAAATGCC
CTGACCGGCC CGGCCGAAAC ACTGAAGCAG GAACTGGACG CGCTGAATAC CAGCGGCACC
TTGCTGGAAT TGGGCCTGGG CCTGGCCGCT GCCATTGCCG GCCTGCTCAT GGTGTGGCTG
ATGGCCCGTG GCGTTACCCG GCCGATCCTC GGCGTGGCTG CCATGCTCAA GGACATTGCC
AGCGGCGAAG GCGACCTGAC CCGCCGCCTG ACCTACCAGA AGCAGGAAGA ACTGGGTGAA
TTGGCCGGCT GGTTCAACCG CTTCCTCGAC AAGTTGCAGC CGACCATCGC CGAGGTCAAA
CGCTCGGTGC AGGCCGCGCG AGGCACTGCC GACCAGTCCT CGGCAATTGC CACTGAAACC
AGCGCCGGCA TGGAGCAGCA GTATCGCCAG GTTGACCAGG TAGCCACCGC CTCGCATGAA
ATGAGCGCCA CCGCCCAGGA TGTCGCCCGC AGCGCCGCGC AGGCGGCACA GGCCGCGCGT
GACGCCGACC AGGCCACCCG GGAAGGCCTG GCCGTGATCG ACCGCACCAC CACCAGCATC
GATACCCTGG CCGCCAACAT GAGCGACGCC ATGGCCGAAG TCGAAGGCCT GGCGCAGAAC
AGCGAAAAGA TCGGTTCGGT GCTGGAGGTG ATCCGCTCGA TTGCCGAACA GACCAACCTG
CTGGCGCTCA ACGCCGCCAT CGAGGCGGCC CGTGCCGGTG AAGCCGGCCG TGGCTTTGCC
GTGGTCGCCG ATGAAGTACG CAACCTGGCT CGACGCACTC AGGAGTCGGT GGAAGAAACC
CGCCAGGTGA TCGAAGCCTT GCAGAACGGC ACCCAGGAAG TGGTCGGCGC CATGGACCAC
AGCCACCGCC AGGCACAGAG TGGCGTTGCG CAGGTCGGCC AGGCCGTCAC TGCACTGCAG
CGCATTGGCC AGGCGGTGAC GGTGATCACC GACATGAACC TGCAGATCGC TTCGGCCGCC
GAAGAGCAAA GCGCGGTAGC CGAGGAAATC AACAGCAACG TGGCGACCAT TCGTGATGTG
ACGGAGTCGC TGTCAGGCCA GGCCAACGAG TCGGCGCGGG TCAGCCAGTC GCTGAACAGC
CTGGCCAACC AGCAGCAGGC GCTGATGGAC CAGTTTCGCG TATGA
|
|---|
| Protein sequence | MPLRQLSIQW KITLLAGLCL AGIVTLLVGL SLYRMDHSSD LVKASSMQML TEAAQSRIES
QGEVQALNIR RQFMDAYQYG AGFARQVLFL REQAEKRFLD AFDLREDMTR QVRAALQANP
DLLGLSLVFE PNALDSKDSL FAGKAELGSN ETGRFALYWS QPRAGQLTAM ALPEHDMANT
EIGPSGQPAN TWWVCPRTTG KVCVVEPYFY DIDGQQVLMT SIVFPLAVNG KIIATLSIDI
NLNSLQALSQ EASRSLYEGR TTVGILSPVG LLAGYSADAS KLAQRFDQVD PAKGAELVGK
LANGKMTILH DQQRLKVLAA FRPIPDAQPW GVLLDVPENA LTGPAETLKQ ELDALNTSGT
LLELGLGLAA AIAGLLMVWL MARGVTRPIL GVAAMLKDIA SGEGDLTRRL TYQKQEELGE
LAGWFNRFLD KLQPTIAEVK RSVQAARGTA DQSSAIATET SAGMEQQYRQ VDQVATASHE
MSATAQDVAR SAAQAAQAAR DADQATREGL AVIDRTTTSI DTLAANMSDA MAEVEGLAQN
SEKIGSVLEV IRSIAEQTNL LALNAAIEAA RAGEAGRGFA VVADEVRNLA RRTQESVEET
RQVIEALQNG TQEVVGAMDH SHRQAQSGVA QVGQAVTALQ RIGQAVTVIT DMNLQIASAA
EEQSAVAEEI NSNVATIRDV TESLSGQANE SARVSQSLNS LANQQQALMD QFRV
|
|---|
| |