Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2342 |
Symbol | |
ID | 5870131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2620062 |
End bp | 2621000 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641547466 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001668578 |
Protein GI | 167033347 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTG GCAACGAAGG CGCAGACGCA AACCCGATGG TGTTCAAACT GCGGCACATG GAAGTGTTCC GGGCGGTGAT GCTGACCGGC TCGATCAGCG CGGCGGCCAA GCTGCTTTAC GTGTCGCAGC CGGCTGTGAG CAAGCTGATC CAGTACATCG AAGGGCGCCT GGCCTATCCG CTGTTCGAGC GCATCAACAA CCGCCTGGTG CCCACGGCCG AAGCGCAGGT GCTGTTTCGT GAAGTCGAGC GGGTGTACCA AGCCGCGTTG GAGGTCAATG AATGCGCCCT GGCACTGGGC GCCGGTGGCC AGCGCAAGCT GCGCATTTCG TGCAGCGCGT CGTTGTCGAC GGTGGTCATC CCCATCGCCC TGGCCCAGCT CAAGCGCGAG TCACCGTCGC TGAACATCGA GTGGCAAACC TCGCTGATGG GCGAAATGCC CAACCAGATC CTGTCGAAAA AGGTCGACCT GTCGATTGCC GCCCTGCCGG TGGTGCATGA CCACCTGCAT TCGCAGGCGT TCATGCGTGG GCGCATGGTG GTGGTGATGC CGCCCGACCA CCCGCTGGCT GGGCAACCCA CGCTGAGCTT GCAACAGTTG GAAGGCCATG CCTTGCTGCT GTTCCGGCCC GACATGCCGT TTGGCAAGCT GCTCGCCGAG CACATCGAGC GCAGCGCAGT GCAGCTGAAA TCACTGTTGT CGTTTACCAA TGCCAACGAG GCTGTGGCGC TGGTCAAACA AGGCATGGGC ATCAGCGTGA TCGACGAGTT CGTTGCGCAG GACAGCGGGC TGGCGGTGGT GCCATTGGCC GATGAAATTC ACTTCGATAT CAGCTTTGTC TATTCACGGT TCGAGCCGCC GTCTCATGCA GCGGTGCATT TGATGCGGGT GTTGCAGGGC CAGGCGCAGA GGCTTGGGAG AGCGGTGGCA TCAAGCTGA
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Protein sequence | MLLGNEGADA NPMVFKLRHM EVFRAVMLTG SISAAAKLLY VSQPAVSKLI QYIEGRLAYP LFERINNRLV PTAEAQVLFR EVERVYQAAL EVNECALALG AGGQRKLRIS CSASLSTVVI PIALAQLKRE SPSLNIEWQT SLMGEMPNQI LSKKVDLSIA ALPVVHDHLH SQAFMRGRMV VVMPPDHPLA GQPTLSLQQL EGHALLLFRP DMPFGKLLAE HIERSAVQLK SLLSFTNANE AVALVKQGMG ISVIDEFVAQ DSGLAVVPLA DEIHFDISFV YSRFEPPSHA AVHLMRVLQG QAQRLGRAVA SS
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