Gene PputGB1_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2220 
Symbol 
ID5870009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2477061 
End bp2477579 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID641547345 
Producthypothetical protein 
Protein accessionYP_001668457 
Protein GI167033226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.785493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTG TGACGCTGTT GCTGCTCCTG TGCCTGCTGG CCCCCGTGGC CCAGGCCAGG 
ACCCTGCCCA ACCCCAACCA GCGGCCTGCC CCCGGCAACG AAGTACCACC GGTACCGATC
GCCCAGGCCG GCTACTCGGT GCCGGTGAAC TACCAATTGC AGTGCGCCGG CTGCCACCGT
GACCATGGCG AAGGCTCGGC GGCCAACGAC ACACCGCGCA TGCAGGGCTT TGTCGGCAAC
TTCCTGCGGG TGCCCGGTGG CCGCGAGTTT CTGGTGCGGG TGCCGGGCAT ATCCCAGTCG
GCGCTGAACG ACCAGCAGAT CGCCGACCTG CTCAACTGGT TGCTGATGCG CGATGGCATG
GCCGGTAACA GTTCGCCTGA ACAGTGGGCG GCCTATACCG GCGCGGAAGT ACACCGTGTG
CGCCAGCAAA GTATGCTGAA CCTGCCTCAT GTGCGCGCCG GCTTGATCGA AGACATGCGG
GCCAGGGGCA TCGCCATCGG CGACGGCCTT GGCCATTGA
 
Protein sequence
MRGVTLLLLL CLLAPVAQAR TLPNPNQRPA PGNEVPPVPI AQAGYSVPVN YQLQCAGCHR 
DHGEGSAAND TPRMQGFVGN FLRVPGGREF LVRVPGISQS ALNDQQIADL LNWLLMRDGM
AGNSSPEQWA AYTGAEVHRV RQQSMLNLPH VRAGLIEDMR ARGIAIGDGL GH