Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2185 |
Symbol | |
ID | 5869974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2438328 |
End bp | 2439518 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641547310 |
Product | aminotransferase class I and II |
Protein accession | YP_001668422 |
Protein GI | 167033191 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.909298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACG CCAAGCTCAC TCAACGCATC GCCGGCGACG GGGCCGCGGC CTGGGACATC CACTACCGCG CCCTGGCGCT GCAGGCCGAG GGCAAGGATA TCCTGCTGCT GTCGGTGGGT GACCCGGACT TCGACACCCC CGCGCCGATC GTCGAGGCGG CCATCGACAG CCTGCGGGCC GGCCACACCC ATTACGCCGA TGTGCGCGGC AAGCTGGCCC TGCGCCAGGC CATCGCCAAC CGCCACCGGA AACGCAGCGG CCAGGCTGTA GGCGCCGATC AGGTGACGGT GCTGGCGGGG GCCCAGTGCG CGCTGTACTG CGTGGCCCAA TGCGTGCTCG AAGCAGGCGA CGAGGTGATC GTCGCCGAAC CGATGTATGT CACCTACGAA GCGGTGTTCG GGGCTTGTGG TGCCAAGGTG GTGCCGGTGC CGGTCAAGCC GGAGAACGGC TTTCGCGTGT GCCCGCGTGA CGTTGCCGAG CGTATTACCC CGCGCACCCG CGCGCTGGCC CTGAACAGCC CGCACAACCC GTCGGGGGCG AGCTTGCCGC GTGCCACCTG GGAGGCATTG GCCGAGCTGT GCATCGCCCA TGACCTTTGG CTGATTTCTG ACGAGGTGTA CAGCGAGCTG CTGTATGAAG GCGAGCATGT CAGCCCCGCC AGCCTGCCGG GCATGGCCGA GCGCACCGCG ACCCTGAACA GCCTGTCGAA GTCGCATGCC ATGACCGGCT GGCGCATGGG CTGGGTAGTC GGTTCGGCCG AGCTGGCCAC GCACCTGGAA AACCTCGCCC TGTGCATGCT GTACGGCTCG CCGGACTTTA TCCAGGATGC CGCCGTGGTG GCGCTGGAAC AGCAACTGCC CGAGCTGGAT GCCATGCGTG AGGCCTACCG CCAGCGCCGC GACCTGGTGT GCGAGCAGTT GGCAGGCTGC CCTGGTATCA AGGCGCTCAA GCCCGACGGC GGCATGTTCG TGATGGTCGA TATCCGCGAT ACCGGCCTCA GCGCCCAGGC CTTCGCCGAC CGCCTGCTGG ACAGCCAGGG CGTGTCGGTG CTGGCGGGTG AGGCCTTTGG CCCCAGCGCC GCCGGGCACA TTCGCCTGGG CCTGGTGCTC GGCAGCGAGG CGTTGGCCGA CGCCTGCCAG CGCATTGCCC GCTGTGCTGG CGAACTGATG CAGGAGCAGG CCGATGCGTG A
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Protein sequence | MRYAKLTQRI AGDGAAAWDI HYRALALQAE GKDILLLSVG DPDFDTPAPI VEAAIDSLRA GHTHYADVRG KLALRQAIAN RHRKRSGQAV GADQVTVLAG AQCALYCVAQ CVLEAGDEVI VAEPMYVTYE AVFGACGAKV VPVPVKPENG FRVCPRDVAE RITPRTRALA LNSPHNPSGA SLPRATWEAL AELCIAHDLW LISDEVYSEL LYEGEHVSPA SLPGMAERTA TLNSLSKSHA MTGWRMGWVV GSAELATHLE NLALCMLYGS PDFIQDAAVV ALEQQLPELD AMREAYRQRR DLVCEQLAGC PGIKALKPDG GMFVMVDIRD TGLSAQAFAD RLLDSQGVSV LAGEAFGPSA AGHIRLGLVL GSEALADACQ RIARCAGELM QEQADA
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