| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2172 |
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| Symbol | |
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| ID | 5869961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2420311 |
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| End bp | 2422773 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547297 |
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| Product | hypothetical protein |
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| Protein accession | YP_001668409 |
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| Protein GI | 167033178 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.78559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGT TGTCGCTGGC ATTGATGGCG TTGCTCAGCC ATTGGCGGCG CCACCGCGTG
CAGTGCTTGA GTATCTTCAC TGGCCTGTGG CTGGCCACGG CGTTGTGGAC CGGGGTGCAG
GCGCTGAACA GCCAGGCACG CAGTGACTAT GCCCGGGCCA GCGCGGTTTT GGCCGGGCCG
TTGCAGGCGC AATTGCTGCC GCGCACTGGC GAGCGCTTCG ACCAGGGTTT GTACGTGCAA
CTGCGCAGGC TGGGCTGGGC GGTATCACCG GTGCTGGAAG GGCGCTTGCG CCTGCCGGGC
GAGCCGGCGC GCAGCGTGCG GCTGATTGGC ATCGAGCCAT TGAGCCTGTC GCCGGCCAGC
AGCATTGCCG GTGTACAACT GCAGGCATTC GACCTGCAGG CTTTTATCGG CACGCCCGGG
CAAGCCTGGG TTGGGCCAGA CACCTTGCGT CAGTTGAGCG CAAACCCCGC GCAGCGGGCC
CGCGACAGCG AAGGGCAGTT GCTGCCGCCT TTGGTTTTGC AGCCCGCGTT GGCGCCTGGG
GTGATGGTGG TGGACATCGG CCACGCGCAG GCGTTGCTGC ATGCATCTGG GCAGTTGTCA
CGCCTGCTGC TGGCCGGGGC ACCTGGGCCA TTGCCGGCAG ATATCGCCCC CTTCCTCGAA
CTTCAAACAC AGCAGGACGA TGGCGGTTTG CAGCGCCTGA CCGACAGTTT CCACCTCAAC
CTGACTGCGC TCGGCCTGCT GGCGTTCATC GTCGGCTTGT TCATCGCCCA CGCCGCCATC
GGCCTGGCGC TGGAACAGCG GCGTGGGCTG ATCCGCAACT TGCGCGCCAG CGGCATCAGC
CTGAAGACCC TGCTGTATGC ACTGTTGCTG GAGTTGGGCC TGTTCGCGGT GCTGGGCGGG
CTTGCCGGGG TGGCCAGTGG TTATGCCTTG GCCGCGTGGC TGCTGCCCGA TGTGGCCGCC
AGTTTACGCG GCCTGTATGG CGCACAGGTG GCGGGTACGC TGAACCTGCC TGCGTGGTGG
TGGCTGCTGG GCGTGCTGGT GAGTGTATTC GGGGCATTGC TGGCAGGGCT GGGCAGCGTC
ATGCGTGCGG CCCGGTTGCC GTTGCTGGCG CTGGCGCAAC CTCAAGCCTG GCGGCTGGCG
CAGGGGCCTT GGCTGAGGCG TCAGGCATTG TTCGCGGGCT TGCTGCTGTT GCTGGCCTTG
GGCTGTGGCG TGTTCGGAGC CAGCCTGCCC AGCGCGTTCG CCATGCTGGC GGGGTTGCTG
CTGGCGGCAG CGCTGCTGTT ACCGGGCATG CTCGACCGGG TGCTGGCCTG GCTGGCGCGC
CGCTGCCAGC GGCCATTGGC GCAATGGTTC GTTGCCGACA GCCGCCAGCA ACTGCCGGCC
CTGAGCCTGG CGTTGATGGC CCTTTTGCTG GCGCTGGCTG CCAGTGTTGG CGTGGGCAGC
ATGACCGAGG GTTTTCGCAA GACGTTTGTC GGTTGGCTTG GCCAGCGCCT GTCCGCCGAC
CTGTATGTCA CCCCACGCGA TACAGCCCAA GGCCTGCAGA TAGTCGAGTG GCTTGAGCAG
CAGCCTGCGG CCAGTGTGGT GCTGCCCGGC TGGCGCGTGG ACATTCAACT ACAAGGTTGG
CCGGTACAAG TGCAGGGCAT TGTCGATCAC TCCGTTTATC GAACGCGCTG GCCGCTATTG
GAACAACAGC CACATGCCTG GCAGCGACTG GCCCGCGGGC AGGCTGTAAT GCTCAGCGAA
CAGTTGGCCA GGCGGTTGAA ACTGCAACTG GGCGATAACC TCAAGCTGCC TGCAAACACG
TCGCCGGCCT TGCCTGTTGT GGGGATCTAT GCCGATTACG GCAACCCCAA GGGGCATGTC
CTGGCCAATG CCGGCTGGTT GCGCGAAAAC TGGCCACAGG CAACCCTGAC CGGCTTGAGC
GTCGACTTGG CCGCTGAACG GGTGCCGGCG CTCAAGGTCG CTCTGCAACG GCATTTTGCC
CTCGACGACA GCCGCGTGGT CGAGCAGGCG CGCCTGAAGC GCTGGTCGAC CGACGTGTTC
AACCGCACCT TTGCCGCCAC CGCTGCCCTC AACAGCCTCA CCCTTGGCGT GGCTGGCGTG
GCGTTGTTCA TCAACCTGTT GACCCTGGGC CAGTCCCGGC TGGGCCAGCT GGCACCGCTA
TGGGCGCTGG GTGTGCGGCG TATGCAACTG GTCTGGCTGG GCCTTGGCCA GACACTCATG
CTGAGCAGCC TCACCGTGTT GATGGCGATC CCGCTGGGGT TGCTGCTGGC CTGGTGCCTG
GTCGCGGTGG TCAATGTTCA GGCGTTTGGC TGGCGCCTGC CGCTCTATGT CTTTCCCGTG
CAGTTGCTGC AGTTGGCCAT GTTGGGGTTG TTCACCAGCC TGCTGGCCAG CGCCTGGCCG
CTGTGGCAGC TGGCGCGCCG CCAGCCGCGC GAACTGTTGA GGCCATTTGC CGATGAAGCG
TAA
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| Protein sequence | MRLLSLALMA LLSHWRRHRV QCLSIFTGLW LATALWTGVQ ALNSQARSDY ARASAVLAGP
LQAQLLPRTG ERFDQGLYVQ LRRLGWAVSP VLEGRLRLPG EPARSVRLIG IEPLSLSPAS
SIAGVQLQAF DLQAFIGTPG QAWVGPDTLR QLSANPAQRA RDSEGQLLPP LVLQPALAPG
VMVVDIGHAQ ALLHASGQLS RLLLAGAPGP LPADIAPFLE LQTQQDDGGL QRLTDSFHLN
LTALGLLAFI VGLFIAHAAI GLALEQRRGL IRNLRASGIS LKTLLYALLL ELGLFAVLGG
LAGVASGYAL AAWLLPDVAA SLRGLYGAQV AGTLNLPAWW WLLGVLVSVF GALLAGLGSV
MRAARLPLLA LAQPQAWRLA QGPWLRRQAL FAGLLLLLAL GCGVFGASLP SAFAMLAGLL
LAAALLLPGM LDRVLAWLAR RCQRPLAQWF VADSRQQLPA LSLALMALLL ALAASVGVGS
MTEGFRKTFV GWLGQRLSAD LYVTPRDTAQ GLQIVEWLEQ QPAASVVLPG WRVDIQLQGW
PVQVQGIVDH SVYRTRWPLL EQQPHAWQRL ARGQAVMLSE QLARRLKLQL GDNLKLPANT
SPALPVVGIY ADYGNPKGHV LANAGWLREN WPQATLTGLS VDLAAERVPA LKVALQRHFA
LDDSRVVEQA RLKRWSTDVF NRTFAATAAL NSLTLGVAGV ALFINLLTLG QSRLGQLAPL
WALGVRRMQL VWLGLGQTLM LSSLTVLMAI PLGLLLAWCL VAVVNVQAFG WRLPLYVFPV
QLLQLAMLGL FTSLLASAWP LWQLARRQPR ELLRPFADEA
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