| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2060 |
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| Symbol | |
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| ID | 5869849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2312094 |
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| End bp | 2314220 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641547185 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001668297 |
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| Protein GI | 167033066 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.267326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTA TGTTCAAGCT TCACCCCCTG GCGGCCTGCC TGGCCGTCGC CCTGCCGGCC
TTGGCCGATG ACCGTGCCCC GCCGCCTCTG GCCTTGCCTT CCACGGCCAT CACCGACACC
CTCGACAGCC ACGCCATCGA CCTGGCCACG CCTACCCAGG CCGGCTCGCG CCTTGGCCTG
AGTGCCCTGG AAACACCCGC CAGTACCAGC AGCATCAGTG CCGAGCAGAT TCAGCAGCGC
AACAACCTCA CCGTGCAGGA TGCGGTGACC CGCTCGCCGG GCATCACCTT CGTCGGCTCC
CCAGGCGACG GCGGCACCGG CCTGTCCGCC CGCGGCTTTG CCGGGCACAG TTCGGTGATG
ACCCTGTTCG ACGGCACGCG CCTTTACACC GGCGCCGGCA CGCAAACGTT CCCTGTCGAC
CCGTGGATGG TCGAACGTAT CGATGTGATT CGCGGCCCGG CTTCGGTACT GCATGGCGAA
GGCGCCACCG GCGCGGTCGT CAACGTGATC CCGAAAAAAC CGTTTGCCGG CGAAGTGCGC
AACCACCTGC GTCTGGGCTA CGGCTCATGG GACCGTCAGC AGCTCGGCCT GGACAGCGGC
GGCAGCCTCA GCGAGCGCCT GAGCTATCGC CTTACGCTGA ACCAGCAAGA TGGCAATGGT
TGGGTCGACC GCACCCATTC GCGCAGCCTG GCCGTTAGCG CAGCGCTGCG TTTCGATGCC
AGTGACGACC TCAGCTTCAC CCTCGCCCAC GACCGTGGCG AGGCGCAGCC CGCCAACTAC
TACGGCACGC CGCTGATCGA CGGCCACTAT CGCAGTAGCC TGCGCAACAA GAACTACAAC
GTACAGAATG ACGTGCAGCG TTATGACGAC GAGTGGACCC GGCTGACCAC CGATTGGACG
CTGAACGACC ACCTCAGCGC CAGCAACCAG CTGTACTACA TCAAGAGCCG CCGCCACTGG
CGCAACGCCG AAGACTACAG CTGGGACGCC GAGCGTCAGC AGTTGCTGCG CGGCAGCTAC
CTGGAGATCA AGCACAACCA GGAACAGTTC GGCGACCGCC AGACCTTCAC CTTCGACCAC
ACCCTGTTCG GCCTGGCCAG CAAGACCGTG GTCGGGGCCG AGTACAACAA GGTGCGCTTC
AACGTCGACA GCAATTCACC CTACAACGAT GTCGGCGGCG ACTACATCGA CCCATGGCAA
CCGCAGCCCG GCGGGTTCCA CAGTGCCTCG CCGCTGCGAC CGCAAACCTT GTCCACCACC
CATACCTTTG CCCTGTTCGC CGAGAACCGC CTGCAGCTCA GCGACCGGCT GTCGCTGGTA
ACCGGCGTGC GCCGCGACCA GAACCACATC GACCGCGACA ACCTGACCAA CGACAGCCGC
AGTGACCGCA GCCTGCAAGG TGGCAACTGG CGCGCTGGGC TGGTGTTCGC GGTCACTGAC
GACCTGTCAC TGTATGGCCA GTACTCCACC AGCGAGGAAG GGGTCAACAA CCTCATCAGC
CTCAGCCCCA CCCAGATGCA CTATGACTTG ACCGAAGCGA AGCAGACCGA GGTAGGCCTG
AAGCAGCGCT TCTGGGAAGG CCGTGGCGAA TGGACACTGG CCGCCTACCA CATCGTCAAG
AAGAAGCTGC TGGTAGACGA CCCGATCACC CACGAGAAGC AACAGGCTGG CCAGCAGACC
TCCGATGGCC TCGAAGCGAC CTTGGAACTG GCGCTGGCGC ACCAATGGCA GGTGTCTGCC
AACGCATCGC TGGTGCGCGC AAGGTATGAC GACTTCGACG AGATGGTCGG CGGCGTGGCG
CAGGACCGTG CCGGCAACCG GCCGGCCAAC GTGCCACGGC GTACCGCCAA CCTGTGGTTG
AGCAAAGGTT TCGGCCAACA GGTGGAAGCC GGCATTGGCG CGCGCTATGT GGATGAGCGT
TATGCCGACA CCGCCAATAC CCAAAGCGCC CCCGGCTACA CCGTGGTCGA TGCCAACATC
GCCTGGCAGG TGTTGCCTGA TGTACGGCTG GGGTTGCAGT TGAACAACCT GTTCGATCGC
GAGTATGTGC AGTCGGCGTT CAGCGGGCAG CAGTGGTTGA TGGGGATGCC GCGCTCGTAT
TTTGCGACGG TGGATTACAC CTTCTGA
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| Protein sequence | MSRMFKLHPL AACLAVALPA LADDRAPPPL ALPSTAITDT LDSHAIDLAT PTQAGSRLGL
SALETPASTS SISAEQIQQR NNLTVQDAVT RSPGITFVGS PGDGGTGLSA RGFAGHSSVM
TLFDGTRLYT GAGTQTFPVD PWMVERIDVI RGPASVLHGE GATGAVVNVI PKKPFAGEVR
NHLRLGYGSW DRQQLGLDSG GSLSERLSYR LTLNQQDGNG WVDRTHSRSL AVSAALRFDA
SDDLSFTLAH DRGEAQPANY YGTPLIDGHY RSSLRNKNYN VQNDVQRYDD EWTRLTTDWT
LNDHLSASNQ LYYIKSRRHW RNAEDYSWDA ERQQLLRGSY LEIKHNQEQF GDRQTFTFDH
TLFGLASKTV VGAEYNKVRF NVDSNSPYND VGGDYIDPWQ PQPGGFHSAS PLRPQTLSTT
HTFALFAENR LQLSDRLSLV TGVRRDQNHI DRDNLTNDSR SDRSLQGGNW RAGLVFAVTD
DLSLYGQYST SEEGVNNLIS LSPTQMHYDL TEAKQTEVGL KQRFWEGRGE WTLAAYHIVK
KKLLVDDPIT HEKQQAGQQT SDGLEATLEL ALAHQWQVSA NASLVRARYD DFDEMVGGVA
QDRAGNRPAN VPRRTANLWL SKGFGQQVEA GIGARYVDER YADTANTQSA PGYTVVDANI
AWQVLPDVRL GLQLNNLFDR EYVQSAFSGQ QWLMGMPRSY FATVDYTF
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