| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2033 |
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| Symbol | |
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| ID | 5869822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2280029 |
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| End bp | 2281333 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547158 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001668270 |
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| Protein GI | 167033039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.880129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA CCGCTTCCGC CCAGCCACGC CGTGCCGCCG CTGCCGCGTT CATCGGCACC
ATGATCGAGT GGTACGACTT CTACATTTAC GCCACCGCCG CCGCCCTGGT GTTCGGTGCC
TTGTTCTTCC CCTCCGACGA CAGCCTGTTC AGCACCATGG CCGCGTTCGG CACCTTCGCC
GTGGGCTTTT TCGCCCGGCC GTTGGGTGGC ATTGTCTTCG GCCACGTGGG CGACCGTATC
GGCCGCAAGA AGTCGCTGGT CATCACCCTG CTGATGATGG GCATCGTCAC CGTGTGTATC
GGCCTGCTGC CGACTTACGC GCAGATCGGT GCCACCGCAC CGGTGCTGTT GATCCTGCTG
CGCATCGTCC AGGGCATCGC CGTGGGCGGC GAGTGGGGTG GGGCGGTGCT GATGGCCGGC
GAGCATGCGC CCAAAGGCCG GCGCAACTTC TTCGCTTCGT TCGCCCAACT GGGCAGCCCG
GCGGGCCTGA TTCTGTCGCT GCTGGCCTTC GGCGCGGTGA CCCGCCTGCC TGAAGACGAG
CTGATGAGCT GGGGCTGGCG CGTGCCGTTC CTGGCCAGCG CGTTGCTGCT GCTGGTGGGC
CTGGCGATTC GCCTGGGGGT GAACGAGTCG CCCGAGTTCA TCGCCAGCCG CGAACAGGCA
GAGAAGGCCC GGCGCAAAGA GCAGGCGCCG GTTTTCGAAG TGCTGCGCAC CGCCTGGCGC
CCGCTGTTGT TGTGCATCGG TGCCAACACC TTGGGCATTG CCGGGGTCTA TTTCACCAAC
ACCTTCATGA TCAGCTACAC CACTCAACAA TTGCACCTGG AGCGCTCGCT GATACTTGAG
TGCCTGTTCT TCGTGGCGAT CATCCAGTTC TGCGTGCAAC CGCTGGCTGC CTGGCTGTCG
GAGAAGATCG GTGCCACGCG CTTCCTGGCC CTGGTCGCGT TGCTGGCGAT GGCCTCGCCG
TACCCGATGT TCGTGCTGGT CAGCTCGGGC CAGGGGCCGT TGATCGTACT GGGCATCGCC
CTGGCTGCAG CCTGCATGGC CTCTTTCTAC GCGGTGATAG CTGGCTATGT CAGCGGTATG
TTCGAAACCC GCGTGCGCTA TACCGCCATT TCCTTGGCCT ACCAGGTCTG CGGCGCCATC
GCTGGCGGCC TTACCCCGCT GATCGGCACC TGGTTGGCTC ACACCTTCAG CGGCCAGTGG
TGGCCGATGG CCGTGTTCTA CACCCTGATC GCCACCGTCT CGCTGGTCTG CGTGCTTGCC
CTGGCGCGCC AGTATGCCCG TAGCCAGCGC CTGGAACTGG CCTGA
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| Protein sequence | MKPTASAQPR RAAAAAFIGT MIEWYDFYIY ATAAALVFGA LFFPSDDSLF STMAAFGTFA
VGFFARPLGG IVFGHVGDRI GRKKSLVITL LMMGIVTVCI GLLPTYAQIG ATAPVLLILL
RIVQGIAVGG EWGGAVLMAG EHAPKGRRNF FASFAQLGSP AGLILSLLAF GAVTRLPEDE
LMSWGWRVPF LASALLLLVG LAIRLGVNES PEFIASREQA EKARRKEQAP VFEVLRTAWR
PLLLCIGANT LGIAGVYFTN TFMISYTTQQ LHLERSLILE CLFFVAIIQF CVQPLAAWLS
EKIGATRFLA LVALLAMASP YPMFVLVSSG QGPLIVLGIA LAAACMASFY AVIAGYVSGM
FETRVRYTAI SLAYQVCGAI AGGLTPLIGT WLAHTFSGQW WPMAVFYTLI ATVSLVCVLA
LARQYARSQR LELA
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