Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2015 |
Symbol | |
ID | 5869804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2263978 |
End bp | 2264985 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641547140 |
Product | 5'-nucleotidase |
Protein accession | YP_001668252 |
Protein GI | 167033021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.764582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTACC CTATTGAAGA AAAACTGGTC ATCGGCGTTG CCTCGAGTGC GCTGTTCGAC CTCACTGTCT CGGACGACAT CTACAAGTCC GAAGGTGTCG AGGCCTATCG CCAACACCAG GAGCAAAACC TGGACGAGCC GTTTCCCCGA GGTGTGGCGT TCCCTTTCAT TCGCCGCTTC CTGAGCATCA ATCAAGCCTT CCCCGAGCAA TTGCCAGTGG AGGTGGTACT GCTCTCGCGC AACTCGCCCG AAACCGGCCT GCGGGTGTTT CGCTCGATCA ACCATTATCA GCTGGACATC ACCCGCGCGG CGTTCATGTC GGGCCGCTCG CCTTACGAAT ACATCCCGGC ATTCAATGCC TCGCTGTTCC TCAGTGCCAA TGAGGAAGAC GTGCAAAAAG CCATCGACGC CAACTACCCG GCCGGGCGCG TGCTGCCTAC ACGCATCTAC GACGATGAAA TCGACACAGA GCTACGGGTG GCCTTCGACT TCGATGGCGT GATCGCCGAC GACGAGGCAG AGAGCGTGTA CAAGCGCAAC GACAACCTGG ACGACTTTCA GGAACATGAG CGCGTGCACA AGGGCACCCC GCATTCGCCT GGGCCGTTGG CGGACCTGTA CCGCAAGCTT TCGCTGATAC GCATGCTCGA AGATCGCAAG CTGGCCGAGG ACCCGACGTA CAAGCGAATT TTGCGCATTG CCATCGTCAC GGCGCGCAAT GCACCTTCCC ATGAGCGGGT GGTGACCACC TTGAAGGATT GGGGCGTGTC GCCAGATGAG TGCTTCTTTC TGGGTGGGAT GGAGAAACCC AGGGTGCTGT CGATCCTCAA ACCGCATGTG TTCTTCGACG ACCAGCGCAC GCATTTGCAA TCGCCAGCGG GGAATCTGCC GATGGTACAT GTGCCGTTCG GCGTGGCGAA CAAGAACGCT ACGCTGCAGC GTTCCCAGGC CGCCGTGCCA CCCGCCGAAA CGGTGCAAGC TGAACACCTA CAGCACGATA GCCAGTAG
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Protein sequence | MPYPIEEKLV IGVASSALFD LTVSDDIYKS EGVEAYRQHQ EQNLDEPFPR GVAFPFIRRF LSINQAFPEQ LPVEVVLLSR NSPETGLRVF RSINHYQLDI TRAAFMSGRS PYEYIPAFNA SLFLSANEED VQKAIDANYP AGRVLPTRIY DDEIDTELRV AFDFDGVIAD DEAESVYKRN DNLDDFQEHE RVHKGTPHSP GPLADLYRKL SLIRMLEDRK LAEDPTYKRI LRIAIVTARN APSHERVVTT LKDWGVSPDE CFFLGGMEKP RVLSILKPHV FFDDQRTHLQ SPAGNLPMVH VPFGVANKNA TLQRSQAAVP PAETVQAEHL QHDSQ
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