Gene PputGB1_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2015 
Symbol 
ID5869804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2263978 
End bp2264985 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID641547140 
Product5'-nucleotidase 
Protein accessionYP_001668252 
Protein GI167033021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.764582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACC CTATTGAAGA AAAACTGGTC ATCGGCGTTG CCTCGAGTGC GCTGTTCGAC 
CTCACTGTCT CGGACGACAT CTACAAGTCC GAAGGTGTCG AGGCCTATCG CCAACACCAG
GAGCAAAACC TGGACGAGCC GTTTCCCCGA GGTGTGGCGT TCCCTTTCAT TCGCCGCTTC
CTGAGCATCA ATCAAGCCTT CCCCGAGCAA TTGCCAGTGG AGGTGGTACT GCTCTCGCGC
AACTCGCCCG AAACCGGCCT GCGGGTGTTT CGCTCGATCA ACCATTATCA GCTGGACATC
ACCCGCGCGG CGTTCATGTC GGGCCGCTCG CCTTACGAAT ACATCCCGGC ATTCAATGCC
TCGCTGTTCC TCAGTGCCAA TGAGGAAGAC GTGCAAAAAG CCATCGACGC CAACTACCCG
GCCGGGCGCG TGCTGCCTAC ACGCATCTAC GACGATGAAA TCGACACAGA GCTACGGGTG
GCCTTCGACT TCGATGGCGT GATCGCCGAC GACGAGGCAG AGAGCGTGTA CAAGCGCAAC
GACAACCTGG ACGACTTTCA GGAACATGAG CGCGTGCACA AGGGCACCCC GCATTCGCCT
GGGCCGTTGG CGGACCTGTA CCGCAAGCTT TCGCTGATAC GCATGCTCGA AGATCGCAAG
CTGGCCGAGG ACCCGACGTA CAAGCGAATT TTGCGCATTG CCATCGTCAC GGCGCGCAAT
GCACCTTCCC ATGAGCGGGT GGTGACCACC TTGAAGGATT GGGGCGTGTC GCCAGATGAG
TGCTTCTTTC TGGGTGGGAT GGAGAAACCC AGGGTGCTGT CGATCCTCAA ACCGCATGTG
TTCTTCGACG ACCAGCGCAC GCATTTGCAA TCGCCAGCGG GGAATCTGCC GATGGTACAT
GTGCCGTTCG GCGTGGCGAA CAAGAACGCT ACGCTGCAGC GTTCCCAGGC CGCCGTGCCA
CCCGCCGAAA CGGTGCAAGC TGAACACCTA CAGCACGATA GCCAGTAG
 
Protein sequence
MPYPIEEKLV IGVASSALFD LTVSDDIYKS EGVEAYRQHQ EQNLDEPFPR GVAFPFIRRF 
LSINQAFPEQ LPVEVVLLSR NSPETGLRVF RSINHYQLDI TRAAFMSGRS PYEYIPAFNA
SLFLSANEED VQKAIDANYP AGRVLPTRIY DDEIDTELRV AFDFDGVIAD DEAESVYKRN
DNLDDFQEHE RVHKGTPHSP GPLADLYRKL SLIRMLEDRK LAEDPTYKRI LRIAIVTARN
APSHERVVTT LKDWGVSPDE CFFLGGMEKP RVLSILKPHV FFDDQRTHLQ SPAGNLPMVH
VPFGVANKNA TLQRSQAAVP PAETVQAEHL QHDSQ