Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1891 |
Symbol | |
ID | 5869676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2128195 |
End bp | 2129259 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641547013 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001668130 |
Protein GI | 167032899 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.529227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCT TTATCGATGT GCAAGACCTG GCCCGCCTGG TCAACCGCAA AGGCCTGCCT ACCTGCCTGC TGGAAATGGC CGAATACATC CGCCAGGACT ACCTGCGCTG GCCCGCCTTC GAGAAATGCG CCCGGGTTGC CAACCATTGC GCGGACGGGG TGATCGAGCT GATGCCGGTT GCCGATGCCA GTCGCTACGC CTTCAAGTAC GTCAACGGCC ACCCGAAGAA CACCCGCCAC GGCCTGCCCA CGGTGATGGC CTTCGGCGCA CTGGCCAGCA TCGATACCGG CGCACCGTTG CTGCTCAGCG AGATGACCCT GACCACGGCC ATTCGCACGG CGGCCACCTC GGCCCTGGCC GCCCGCTACC TGGCGCGAGA GGACAGCCGC AGCATGGCGC TGATCGGCAA TGGCTCGCAA AGCGAGTTTC AGGCCATCGC CTTCAATACC CTGCTGGGCA TTGACGAAAT ACGCCTGTTC GACATCGACC CCGCCGCCTC GGCCAAGCTG GTCGCCAACC TGGCCAACCG CCCCGGCCTC AAGCTGACCA TCGCACGCTC CGTGGCCGAT GCGGTGCGCG GTGCCGATAT CGTCACCACG GTGACCGCCG ACAAAGCCTA CGCCACCATC CTCACCCCCG AGATGATCGA GCCGGGCATG CACCTGAACG CCGTGGGCGG TGACTGCCCA GGCAAGACCG AACTGCACCG GGCAATAGTC GAGCGGGCTC GGGTGATTGT CGAGTACGAG CCGCAAAGCC GGGTTGAAGG CGAGATTCAG CAGATGCCGG CGGATTCGCC GGTGACCGAG TTCTGGCGGG TGGTGGCGGG TGAGGCCAAG GGCCGCGAGC ACGCCGAGCA GGTGACGCTG TTCGACTCGG TCGGGTTTGC CTTGGAGGAC TTTTCGGCGC TGCGTTATGT GCTGGATACG GCGCAGGCGC TGGGTATCGG CAAGGACATC GGGCTGGTGC CGGTGCTGGA GGATCCGAAG GATCTGTATG CGCTTTTACA GCCGCGCAAG GTTGAGTTGC GAGCGGTGCC CAAGGCTGAT TCCGTATGCG CCTGA
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Protein sequence | MTRFIDVQDL ARLVNRKGLP TCLLEMAEYI RQDYLRWPAF EKCARVANHC ADGVIELMPV ADASRYAFKY VNGHPKNTRH GLPTVMAFGA LASIDTGAPL LLSEMTLTTA IRTAATSALA ARYLAREDSR SMALIGNGSQ SEFQAIAFNT LLGIDEIRLF DIDPAASAKL VANLANRPGL KLTIARSVAD AVRGADIVTT VTADKAYATI LTPEMIEPGM HLNAVGGDCP GKTELHRAIV ERARVIVEYE PQSRVEGEIQ QMPADSPVTE FWRVVAGEAK GREHAEQVTL FDSVGFALED FSALRYVLDT AQALGIGKDI GLVPVLEDPK DLYALLQPRK VELRAVPKAD SVCA
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