| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1888 |
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| Symbol | |
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| ID | 5869673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2124371 |
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| End bp | 2125936 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641547010 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001668127 |
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| Protein GI | 167032896 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.378373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTCA ACTTGCCGGT AACCCCGGTC GAGCAACGTT TCCCCTCAGA TCAGCGGCTG
ATTTCTGCTA CCGATACCGC CAGCCTGATC ACCTACTGCA ACCCTGAATT CGCTGCCATC
AGCGGCTATA GCGAGGCCGA ACTGATCGGC AGCCCGCACA ACCTGGTGCG CCACCCGGAC
ATGCCGCCGG CGGTGTACGA GCTGATGTGG CGCTACCTGA AAGCCGGCAA GAGCTGGATG
GGTATCGTCA AGAACCGCTG CCGTAACGGC GACTACTACT GGGTCAACGC CTACGTCACG
CCCATCCTCG AAGGCGGGCG GGTAGTGGGC TACGAGTCGG TGCGGGTGTG CCCCACCCGC
GAGCAGGTGG CCCGTGCCGA GGCTTTGTAT GCGCGGCTGC GTAACGGTCA AGCGGCATTG
TCGGCGCCGC GCCGGTTGAG CTTGCTGGCG CAGGCCCTGG CCTTGCCACT GGCCGGGGGA
GTGCTGGCAG TTGGCGCCCA TCAGCTGTGG CCTGGCCTGG TGGGGCAGGG GCTGACGGTG
GGGCTGTTCG TGGCCTATGG CTTGTGGGTG CGCAACGCCC TTGGGCGACA GCTTCAGCAG
GTTGTGCAGG GCGCGCAAGG CACGTTTGCC GACCCGGTCG CCGCCTTGAC CTACAGCGAC
CTGCCGGGTG CCGCCGGGCA GTTGCAACTG ATGCTGATCA GCGAAGAGGC ACGCCTGAAA
ACCGCATTGA CGCGGCTAAG TGACCTGGCC GGGCAAATGG CGGTAGCCGC CCACGATGCC
GGGCAGTTGT CGCGCAGCAC CGAGGCGGCC TTGCTCAAGC AGCGTGCCGA AACTGACCTG
AGCGCCACGG CAATGAATCA GATGGCCGCC TCTATCGGCG AAGTGGCCAA TCACGTCCAG
TTGACCGCCG CCGAGGCACA CACCGCACAC CTGCTGGCCG AGCAGGGTAG CCAGGTGGCC
GATGCCAGCG GCGCGGCCAT TCGGACCCTG GCCAGCACCG TGACGCAGAT CAACCAGGCG
GTCAGCCACC TCGCTGGTCA GACCGGTGCC ATCGCCGAGG CTGCTGGGAT GATTCGCGGC
ATTGCTGAGC AGACCAACCT GCTGGCCCTC AACGCCGCCA TCGAGGCGGC GCGTGCAGGC
GAGCAGGGCC GCGGTTTTGC CGTGGTCGCC GATGAGGTGC GGGCATTGGC CGACAAGACT
CGCCAGTCGA CCCTGCACAT TCAGGCGATC ATCGATGCCC TGCGCAGTGG CGCCGAGGAG
GCCGTGGCGA TCGCCAGCCA AGGCATCGAT GGCGCCGAGC AGGGCGTTGC CCAGGTACAG
GAAGCCCGGC AGGCGCTGCA CGGCATTCGT GACGCGGTGC AGCGCATCAG TGACATGAGC
CAACAGATGG CCACCGCCTC GCAGCAGCAG TCGGCGGTGG CCGAAGACGT TTCGCGGCAG
ATCAACGGCG TAGCCGGTAT TGCCCAGCAC AGCGCCCACA GCGCCAACGC CGCCGCCTCG
CGCGGCGCCG AACTGGAACA GGTGTGCGCC GGATTGCGCG CCCTGGTGGA GCGCTTCAAC
CGCTAA
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| Protein sequence | MRLNLPVTPV EQRFPSDQRL ISATDTASLI TYCNPEFAAI SGYSEAELIG SPHNLVRHPD
MPPAVYELMW RYLKAGKSWM GIVKNRCRNG DYYWVNAYVT PILEGGRVVG YESVRVCPTR
EQVARAEALY ARLRNGQAAL SAPRRLSLLA QALALPLAGG VLAVGAHQLW PGLVGQGLTV
GLFVAYGLWV RNALGRQLQQ VVQGAQGTFA DPVAALTYSD LPGAAGQLQL MLISEEARLK
TALTRLSDLA GQMAVAAHDA GQLSRSTEAA LLKQRAETDL SATAMNQMAA SIGEVANHVQ
LTAAEAHTAH LLAEQGSQVA DASGAAIRTL ASTVTQINQA VSHLAGQTGA IAEAAGMIRG
IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRALADKT RQSTLHIQAI IDALRSGAEE
AVAIASQGID GAEQGVAQVQ EARQALHGIR DAVQRISDMS QQMATASQQQ SAVAEDVSRQ
INGVAGIAQH SAHSANAAAS RGAELEQVCA GLRALVERFN R
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