Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1850 |
Symbol | |
ID | 5869630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 2077698 |
End bp | 2078186 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546967 |
Product | putative monovalent cation/H+ antiporter subunit E |
Protein accession | YP_001668089 |
Protein GI | 167032858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0391137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC TGTTCCCCGC CCCACTGCTG TCGGTCTCGC TGTTCGGCCT GTGGCTGTTG CTGAACCTCT CGGTAAGCCC TGGCAACCTG CTGCTAGGCG CCGCACTCGG CGTGCTGGCG CCGCTGCTGA TGGCGCCCCT GCGTCCGCAG CATGCCCACG TACGCCGGCC ACTGGTCATC GCCAGGCTGA TCGCCCGGGT CGGCCTGGAT GTAATCATCT CCAACCTGCT GGTTGCTCGT GGCGTGCTGC GTGCCGGCAA GCAGCCTCCA CGCTCCGCGT TCGTCCACAT ACCGCTGGCA CTGCGCGACG CGCACGGCCT GGCAGCGCTG TCGATGATTA CCACGGTGGT ACCGGGCACC GTCTGGTCCG AACTGGCGCT GGACCGCAGT GTCTTGCTGC TGCACGTGTT CGACCTGGAG GATGAAGCGG CCTTCATCCA ACACTTCAAG GACACCTACG AACGCCCGCT GATGGAGATT TTCCAATGA
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Protein sequence | MNRLFPAPLL SVSLFGLWLL LNLSVSPGNL LLGAALGVLA PLLMAPLRPQ HAHVRRPLVI ARLIARVGLD VIISNLLVAR GVLRAGKQPP RSAFVHIPLA LRDAHGLAAL SMITTVVPGT VWSELALDRS VLLLHVFDLE DEAAFIQHFK DTYERPLMEI FQ
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