| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1816 |
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| Symbol | |
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| ID | 5869596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2036767 |
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| End bp | 2037891 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546933 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001668055 |
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| Protein GI | 167032824 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.256693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGT CACCCGTGTC GGGCCTGCTG GCGACTTTCC AGGAGCACTA CGACGACCTG
TTGCAGTTCC TGACCCGGCG CATGAGCGAC CGCCAGCGCG CCGCCGACGT GGCGCAGGAA
ACCTATCTGA AACTGGTGAA CATCGACGAG CAGGCGGTGC CGGTGTTGCA TGCGCGCAGT
TTCATCTTTC GCGTGGCCGG CAACCTGGCA ATCGATGCCT TGCGCCGCGA GAAGCGCATC
GCCGCCAGCC ACGACGACAG TGACGGCGCC TGTGAGGTGG CCTGCCCGGC ACCGGCGCCC
GAGGCGGCAT TGCTGGCCCG CGAGCGCCTG CGGATTCTTG ACCAGGCGCT GTTGCAACTG
CCCGACAACG CCCGCCGGGC GCTGTTGCTC AACCGCGTCG AAGGCCTGAC CCAGAAGCAG
ATCGCTCAAC GCCTGGGCGT TTCCGAGAGC ATGGTGGCGA AGTACATCGG CCAGGCGCTG
CGCCATTGCC GCGGTTGGCT TAAGCAGGCG GGTGTGGCGG CGTCCGTGGT GGTGCTGGTC
GCCGCCGTGG CGGGTTGGCG GCAGGCGCCG ATGCTGCTGG CGGATTACCA CACTGCTGTC
GGCGAGCGGC AGATCATTAC GTTGGCTGAT GGCACGCGGG TGACGCTGAA CAGCGCCAGT
GCCATGAGCG TCGTTTTCAG TGAGCATGAG CGGCGTGTGG TGCTTGATGC CGGTGAAGCA
TTGTTCGAGA CCGCTGCTGA TTCACGGCCG TTTGTGGTCG ATACCGCCGG TGAGCGGGTG
CAGGGCACTG CCGCGACCTT CAGCGTGCGC CGCGATGGCC ACGTGGTGTT GGCGCACGGT
GAGGCCAAGG TAGGTCAACG CGAACTGGCG GTAGCGGCCG ATGCCGGCAT GCAAATGGCC
TGGCAGCGCG GCAAGCTGAT CTTCAACGGC AAGCCGCTGG GGCAGGTACT GGAGGAGCTT
GAGCGATACC GCCATGGGCG CATTGTGCTG TCCGACAGCA AGCTGGCGGC GATGGAGGTG
AGCGGGGTAT TTGATCTGGA TGAGCCTGAG GCCCTGTTGC GGACGCTTGA GCAGCGATAT
GGCCTGAAGG TTACCTACCT GCCGTGGTTG GCCGTGGTGT ATTGA
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| Protein sequence | MLTSPVSGLL ATFQEHYDDL LQFLTRRMSD RQRAADVAQE TYLKLVNIDE QAVPVLHARS
FIFRVAGNLA IDALRREKRI AASHDDSDGA CEVACPAPAP EAALLARERL RILDQALLQL
PDNARRALLL NRVEGLTQKQ IAQRLGVSES MVAKYIGQAL RHCRGWLKQA GVAASVVVLV
AAVAGWRQAP MLLADYHTAV GERQIITLAD GTRVTLNSAS AMSVVFSEHE RRVVLDAGEA
LFETAADSRP FVVDTAGERV QGTAATFSVR RDGHVVLAHG EAKVGQRELA VAADAGMQMA
WQRGKLIFNG KPLGQVLEEL ERYRHGRIVL SDSKLAAMEV SGVFDLDEPE ALLRTLEQRY
GLKVTYLPWL AVVY
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