Gene PputGB1_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1789 
Symbol 
ID5869569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2006974 
End bp2007513 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID641546906 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_001668028 
Protein GI167032797 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG AACAACTAGC TGAGCTACGT GACCGCCTGC GGGCGGAAAA AGGGCAGACC 
AAGGCCGATA GCCCGAAACC GCCCAAGCGC AAGTCGCCCG CGCAGGCGAA GCCGCGTGAG
CAGGACCCGG CGGTGGCAGC GATTTGGCCT CTGCAGAAGC ATTTTCCCTT GGCTTTCCCG
GTCAATCCTG CCCCCAAGGT GCCGCTCAAG GAGGGCATTT TCAAGGATGC CGAGCAACAC
TTGGAGCTGC TTGGGTTAAC CCGTGAGCAG CTGAAACTGG GCATTTCTAC GTGGTGCCGG
GGTGCTCGAT ACTGGGCAAG CATGGTGGAA GATGCACCGC GTCTGGACCT GAACGGGCAG
GCAGCTGGCG TTGTGACCGC CGCCCAGGCA CTGCATGCGA AGCAGCAAGC CTCGCGGCAA
CGTAGCCAGG ACCGCCGCAA CCGGGCGAAG TCCAAAGCGC AGTCGCAGTC GCAGTCGCAG
TCGCAGTCGC AGTCGCAGGC CTCCGCCGCC GACACCGCAG CAGTGCAGAC TACCGACTGA
 
Protein sequence
MGFEQLAELR DRLRAEKGQT KADSPKPPKR KSPAQAKPRE QDPAVAAIWP LQKHFPLAFP 
VNPAPKVPLK EGIFKDAEQH LELLGLTREQ LKLGISTWCR GARYWASMVE DAPRLDLNGQ
AAGVVTAAQA LHAKQQASRQ RSQDRRNRAK SKAQSQSQSQ SQSQSQASAA DTAAVQTTD