Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1789 |
Symbol | |
ID | 5869569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 2006974 |
End bp | 2007513 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546906 |
Product | ProQ activator of osmoprotectant transporter ProP |
Protein accession | YP_001668028 |
Protein GI | 167032797 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTTG AACAACTAGC TGAGCTACGT GACCGCCTGC GGGCGGAAAA AGGGCAGACC AAGGCCGATA GCCCGAAACC GCCCAAGCGC AAGTCGCCCG CGCAGGCGAA GCCGCGTGAG CAGGACCCGG CGGTGGCAGC GATTTGGCCT CTGCAGAAGC ATTTTCCCTT GGCTTTCCCG GTCAATCCTG CCCCCAAGGT GCCGCTCAAG GAGGGCATTT TCAAGGATGC CGAGCAACAC TTGGAGCTGC TTGGGTTAAC CCGTGAGCAG CTGAAACTGG GCATTTCTAC GTGGTGCCGG GGTGCTCGAT ACTGGGCAAG CATGGTGGAA GATGCACCGC GTCTGGACCT GAACGGGCAG GCAGCTGGCG TTGTGACCGC CGCCCAGGCA CTGCATGCGA AGCAGCAAGC CTCGCGGCAA CGTAGCCAGG ACCGCCGCAA CCGGGCGAAG TCCAAAGCGC AGTCGCAGTC GCAGTCGCAG TCGCAGTCGC AGTCGCAGGC CTCCGCCGCC GACACCGCAG CAGTGCAGAC TACCGACTGA
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Protein sequence | MGFEQLAELR DRLRAEKGQT KADSPKPPKR KSPAQAKPRE QDPAVAAIWP LQKHFPLAFP VNPAPKVPLK EGIFKDAEQH LELLGLTREQ LKLGISTWCR GARYWASMVE DAPRLDLNGQ AAGVVTAAQA LHAKQQASRQ RSQDRRNRAK SKAQSQSQSQ SQSQSQASAA DTAAVQTTD
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