Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1714 |
Symbol | |
ID | 5869494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1938717 |
End bp | 1940027 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641546831 |
Product | hypothetical protein |
Protein accession | YP_001667953 |
Protein GI | 167032722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000417514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACG ACAAGGCAAA GGTGCTGCGC ACCGGCTTCT ACACCACCCA GTCGCTGGGC GATAAAGGCT GCATCCGCAT CGACTTCAAG TCACTGGCCG AGCTGCACCA GGCTGACGAC GAGCTGCGCG CGTTCATGGT TATGCCGGCC GAGGCGCGCG CTGTTCATCT TGCGCAAGAA CGTGAACTAC GGGTCTACAT CGCCGGCCCT ATGACCGGAC TGCCTGATTT CAACTTTCCT GCATTCAATG CAGCTGCTGA CTTGATGCGA TCTGCGGGGT GGCATGTTGA AAACCCTGCG GAGCATGGGC ATGTTCATGG TGCCGAATGG GCGGACTATC TGCGCTACGA CATAAGCCGC CTCGCGACCT GCGAGATGAT CATGCTTTTG CCTGGCTGGT CGAAGTCCAA AGGTGCAAAC CTTGAGGTGG CCATAGCCCG CCAACTTGGC ATGCCGATCA AACTGGCTGA TGGCGCTGAA CCAGCCGAGC AGCATCAGGG CGAGCTTGAG CGGCTGCGCA AGGAAAACGA GAGCCTGCGT GCTGGCTGGT ACAAGGACGA GAGCGACAAC AACCGGTACT GGCCTGAGGA ACTGGAAGAG GCCAAAGCCG AACTGGCCGC GCGCACTGCT GATCGCGATG AAAGACTTCG CAAGAACCTG AATTATCGTG ATTTGCTCCG CGCGGTAATC AACGGTAAGT CTCGCACGCA GTTCGATGGC GATTTGTTGC ATCGAATCCA GATGGCCCTA TCTGCCAGCG AAGATCCGAG CGCGGCGGCT GAGTGCGCTA TCTGCCGCGA TCTGGGCGAC CAGTGCATGG AGTGCGAGGA AGTTGAGTTT GCACGCTGGG CCAATGTTCA CTTTGCGGCA GCCGATTTCA GAAAGACCGA TACGGGTGTT TACGTGCAGG ACTGGATGCG CCACGCCTAT GGCGCCTGGT GTGCACGCGC CGCCTTGTTA GGGTTCAAGC CAACCGTGCT TTCCAAATGT GTGCTGTGCG ACCAACTGCA GGCCGACCTG ACGGCGCTAG ACGAAAAGCT CGACCAGACG CAGGACCTCT TGCGCTACAT GGTCTACGAC TATCGATCAG TCGTGCAGGC CGGCTACGAC AAGATCACCG GGCTTGGCAG CGACTGCGAC AGCGTGGCCA AGATGCTGGC CGATAACCCG AACTACCAGA AGGCACTGGC CCTGCTGATG CCGGACCTTG AAAGCCGGCC GGAAGAGCGC GGGACGCCGG AAACGGAACC CTGCTCAGGC TGCGGCACGC CTGGCTACAC CGGCAACTGC GACAAGAGTG TCCCCTACTG A
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Protein sequence | MSNDKAKVLR TGFYTTQSLG DKGCIRIDFK SLAELHQADD ELRAFMVMPA EARAVHLAQE RELRVYIAGP MTGLPDFNFP AFNAAADLMR SAGWHVENPA EHGHVHGAEW ADYLRYDISR LATCEMIMLL PGWSKSKGAN LEVAIARQLG MPIKLADGAE PAEQHQGELE RLRKENESLR AGWYKDESDN NRYWPEELEE AKAELAARTA DRDERLRKNL NYRDLLRAVI NGKSRTQFDG DLLHRIQMAL SASEDPSAAA ECAICRDLGD QCMECEEVEF ARWANVHFAA ADFRKTDTGV YVQDWMRHAY GAWCARAALL GFKPTVLSKC VLCDQLQADL TALDEKLDQT QDLLRYMVYD YRSVVQAGYD KITGLGSDCD SVAKMLADNP NYQKALALLM PDLESRPEER GTPETEPCSG CGTPGYTGNC DKSVPY
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