Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1691 |
Symbol | |
ID | 5869471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1917709 |
End bp | 1918725 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546808 |
Product | ApbE family lipoprotein |
Protein accession | YP_001667930 |
Protein GI | 167032699 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.258239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCACAG CCTTACTGTT CATCTTCCTG CTGCTCACCG CCTGCAACCA AGGCCCCACC CTGGAGCGCC TGGGCGGCCC GACCATGGGC AGCAGCTACA GCATCCAATA CGTCCGCGAG CCCGGCGGCC CGGCGCCGGC CCAGGTGCAG GCAGCGGTCG AAGCCATCCT GAGCGACATC GACCAGCACT ATTCGACCTA TCGCGGTGAC TCCGTCGTCA GCCTTTTCAA CCAGTTACCG GCCAATCAGT GCCTGGCCCT GCCGCCCGAC ATGCTCGAAC TGGTAGCCCT TGGCCAACAG CTGGCCGAGC AGAGCGAAGG CGCCTTCGAC CTCACCGTCG AGCCGCTGCT CGACCTGTGG GGCTTTGGCC CCCAGGCCCG CCACGAGCAG GTGCCCGACC CGCAAACCCT GGCCCAGGTA CGCCTGCGCG TGGGTTACCA GCACCTGCAT GTCAAAGGCC AGTCTCTGTG CAAGGATGCC CCGGTACAGC TCGACTTCAA CAGCATCGCC GCCGGCCACG CTGTCGACCT GATCGCCGCA CGCCTTCAGG CCATGGGCGT GGCCAGCTTC GTCGCCGAGG CTACCGGCGA ATTGAAGGCG GTCGGCCGCA AGCCCGATGG CAGCCCCTGG CGCATTGCCC TGGAGCTGCC CCGCGAAGAC CGCCAGATCG CCCGCCAGAT CATCCCGGTC AATGGCCTTT CAGTATCGAC CTCGGGTGAC TATCGGCACT ATTTCGAGCA GAATGGCCGG CGCTATTCGC ACACCTTCGA TGCCCGCCTG GGGCGCCCGG TCGAGCATGA CCTGGCGGCC GTTACAGTGC TGAGCGCCTC GGCGCTGCAG GCCGACGGCT ATTCGACGCT GCTGTTGATC CTTGGCCCTG AGCGTGGCTG GGATTTTGCC GTGGCGCATG GCTTGGCCGC GGTATTGGTG ACTCGAGCCG AGGGTGGCTT CGTCTCCCGA GCTACGCCCG CGTTCGAACG GGCGGTGAAA GGCGAGCGAA AGCACAAGCA GGGATGA
|
Protein sequence | MRTALLFIFL LLTACNQGPT LERLGGPTMG SSYSIQYVRE PGGPAPAQVQ AAVEAILSDI DQHYSTYRGD SVVSLFNQLP ANQCLALPPD MLELVALGQQ LAEQSEGAFD LTVEPLLDLW GFGPQARHEQ VPDPQTLAQV RLRVGYQHLH VKGQSLCKDA PVQLDFNSIA AGHAVDLIAA RLQAMGVASF VAEATGELKA VGRKPDGSPW RIALELPRED RQIARQIIPV NGLSVSTSGD YRHYFEQNGR RYSHTFDARL GRPVEHDLAA VTVLSASALQ ADGYSTLLLI LGPERGWDFA VAHGLAAVLV TRAEGGFVSR ATPAFERAVK GERKHKQG
|
| |