| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1589 |
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| Symbol | |
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| ID | 5869369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1791817 |
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| End bp | 1792752 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546707 |
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| Product | DNA-binding transcriptional regulator LysR |
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| Protein accession | YP_001667830 |
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| Protein GI | 167032599 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.963842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.282156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATTG TCGACCCACC GAGTGCTGCC GTGAAACTGT CCGTCCGCCA TATCGAAGTG
TTCCGCGCCA TCATGGCCGC AGGCAGTGTC ACCGGCGCGG CGCGGCTGCT GTTCACCTCG
CAGCCCACTG TCAGTCGCGA GCTGGCGCGC CTGGAGCAGG TGACCGGGCT GAATCTGTTC
GAGCGCGAAG GTGGGCGTTT GGTGGCAACG GCCCAGGCAT TGCTGTTGAT CGAAGAGGTC
GAGCGTGCCT ATGTCGGGCT GGAGCGCATC GATCGCTTTG CCCAAGCCAT CCGCAATTTC
GAGCAGGGGC GGCTGGCCAT CACCTGCCTG CCGCTGTTTT CACAGACCTT GTTGCCCAAG
GCCTGTCAGC GCTTTCACCA GCAGCACCGG GGCGTGAGCG TGAGCATCCT GGCGCAGGAG
TCGCCCTTGC TGGAGGAGTC GCTGGTTGCC CAGCAGCACG ACCTTGGCCT GACCGAGGTC
GAGCAGATAC CGCGCGGCGC TTATGGTGAA TTGCTGTTCA GCGCCAACAT GGTGTGCGTG
TTACCCGAGC ATCACCCGTT ACAGGCCAAG GCCGAGCTGG AACTGAGCGA TTTTCACGAG
GTCGATTTCA TCAACCTGGC CAGCCTGGAC ACCTACCGCC AGCGCCTGGA CCAGCACTTT
CGTGCAGCGG GGGTTAACCG CCGCACCATC ATCGAGACCA CCAGCGCCGC GTCGGTGTGC
GCCATGGTCA GGCAAGGCCT GGGGGTGGCG ATCATCAATC CGCTGAGCGG GCTGGAGGCG
GCCCAGGGCG GGCTGCCGAT CCGCAGGTTA CGGGTGTCGG TGCCGTACCA GGTGATGCTG
ATACGCCCGG ACCACCGGCC GGCCTCGGCG GCGGTGGAGC CGTTTTGCGA GGCGTTGCGG
GAGCAGGCGC AGGCGATGCA GGCGGCGTTG CGGTAG
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| Protein sequence | MPIVDPPSAA VKLSVRHIEV FRAIMAAGSV TGAARLLFTS QPTVSRELAR LEQVTGLNLF
EREGGRLVAT AQALLLIEEV ERAYVGLERI DRFAQAIRNF EQGRLAITCL PLFSQTLLPK
ACQRFHQQHR GVSVSILAQE SPLLEESLVA QQHDLGLTEV EQIPRGAYGE LLFSANMVCV
LPEHHPLQAK AELELSDFHE VDFINLASLD TYRQRLDQHF RAAGVNRRTI IETTSAASVC
AMVRQGLGVA IINPLSGLEA AQGGLPIRRL RVSVPYQVML IRPDHRPASA AVEPFCEALR
EQAQAMQAAL R
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