| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1380 |
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| Symbol | |
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| ID | 5869144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1543799 |
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| End bp | 1544869 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546483 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_001667623 |
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| Protein GI | 167032392 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.724349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000724393 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATTC TGGTAACCGG CGGTGCAGGC TTTATCGGGG CGAACTTCGT TTTGGACTGG
CTGGCCGGCA GTGATGAGCC TGTGGTCAAC CTGGACAAAC TTACCTACGC GGGCAATTTG
CAGACCCTGC GCAGCCTTCA GGGCGACAAG CGCCATATCT TTGTGCACGG CGACATTGGC
GATAGCCAGC TCGTCGCAGA ATTACTGAAA GCCCACCAGC CACGCGCCAT CGTCAACTTT
GCCGCCGAGT CCCACGTCGA CCGCTCGATC CACGGCCCGC AAGCCTTCAT CGAAACCAAC
GTCGTTGGCA CCTTCCACTT GCTGGAAGCC GTGCGTGCCT ACTGGGGTGG CTTGAATGGG
CCGGCGCGCC AGGCATTCCG CTTCCTGCAT GTGTCCACAG ACGAAGTCTA TGGTTCGCTA
ACGGCTGGCG AACCGGCCTT CACCGAAACC CACCAGTACC AGCCCAACAG CCCGTACTCG
GCCAGCAAGG CCGCCAGCGA CCACTTGGTG CGTTCGTATC ACCACACCTA TGGCCTGCCG
GTGCTGACCA CCAACTGCTC CAACAATTAC GGCCCCTACC ATTTCCCGGA AAAGCTCATC
CCACTGATGA TCGTCAATGC CTTGGCAGGC AAGCCGCTGC CTGTGTACGG CGACGGCCAG
CAAATTCGCG ACTGGTTGTT CGTCAAGGAT CACTGCAGCG CCATCCGCCG TGTGATGGAA
GCCGGCAAAG CCGGAGAGGT CTACAACGTC GGTGGCTGGA ACGAAAAACC CAATCTGGAA
ATCGTCAACC GTGTCTGTGC GCTGCTGGAC GAACTGCGCC CGCGCACCGA CGGCAAGCCC
TACGCCGAAC AGATCACCTA CGTGACCGAC CGCCCTGGCC ACGACCGCCG TTACGCCATC
GATGCCCGCA AGCTGGAGCG CGAACTGGGC TGGAAACCCA CCGAAACGTT CGAAACCGGC
ATTCGCAAAA CCGTGGCCTG GTACCTCGAC AACCAGGAAT GGGTGCAGAA CGTGCAGTCC
GGCAGCTACC GCGACTGGGT CGAGAAAAAT TACGCAGGGC GTTCTGCATG A
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| Protein sequence | MTILVTGGAG FIGANFVLDW LAGSDEPVVN LDKLTYAGNL QTLRSLQGDK RHIFVHGDIG
DSQLVAELLK AHQPRAIVNF AAESHVDRSI HGPQAFIETN VVGTFHLLEA VRAYWGGLNG
PARQAFRFLH VSTDEVYGSL TAGEPAFTET HQYQPNSPYS ASKAASDHLV RSYHHTYGLP
VLTTNCSNNY GPYHFPEKLI PLMIVNALAG KPLPVYGDGQ QIRDWLFVKD HCSAIRRVME
AGKAGEVYNV GGWNEKPNLE IVNRVCALLD ELRPRTDGKP YAEQITYVTD RPGHDRRYAI
DARKLERELG WKPTETFETG IRKTVAWYLD NQEWVQNVQS GSYRDWVEKN YAGRSA
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