| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1303 |
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| Symbol | |
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| ID | 5869067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1457354 |
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| End bp | 1459906 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546406 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001667546 |
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| Protein GI | 167032315 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.381253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.438898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA CAGTGAGCAG CGGGCAACGA GAGCGACTGG TCATCGTCGG CAACGGCATG
GTCGGCCACC ATTGCGTCGA ACAACTGGTC AGCCGTGGCG CCCTGCAGCG CTTCGAGGTG
CGGGTGTTCG GCGAAGAGCG CCAACGCGCC TACGACCGCG TGCACCTGTC CGAATACTTC
GGTGGCAGTT GTGCCGAAAC CCTGGCCCTG TGCGAGCACG ATTTCTACAA CGCCAACGGC
GTGCACCTGC ACCTGGGTGA GGCTGTGCTG GAGATCGACC GCGAGCGCTG CGAGGTGGTC
ACCGCCGAGG GCCGATACGG CTACGAGCAA CTGGTGCTGG CCACCGGTTC CTACCCCTTC
GTACCGCCGA TCGAAGGCTC CAGCGGCAAT GCCCGGCTGG TGTACCGCAC CCTGGACGAC
CTTGATGGCA TTCGCGCTGC CGCAGCCGGT GCGCGTCGTG GCGTGGTGGT CGGTGGCGGC
CTGCTTGGCC TGGAAGCCGC CAACGCCCTC AAGTCGCTGG GCCTGGAGGC CCACGTCGTT
GAATTCGCTC CACGGCTTAT GCCGGTGCAG TTGGACGGTG AGGGCGGTGC CGCGCTTAAA
GCGCAGATCG AGGCGCTGGG CGTGGGGGTG CACCTGTCAC GTGCCACCCA GTCGATCAAC
GACGGTGAAA GCTACCGCTA TCGCATGAAC TTCGACGGCG GCGAGCACCT GGAAACCGAC
CTGGTCGTGT TCTCCGCTGG TATCCGCCCA CAGGATGCCT TGGGCAGAGC CTGCGGCCTG
GAGATCGCCG CGCGCGGCGG TGTGGTGATC GACAATCACT GCCGCAGCAG CGACCCACGC
ATCTTTGCCA TTGGAGAGTG CGCCTCGTGG AACGGCAGCG TTTTCGGCCT GGTTGCCCCA
GGCTACGGCA TGGCCCGCAA CCTGGCGGCG TTGCTGATGG GGGAGGCGGC GGTCGCGTTC
ACCGGCGCCG ACATGTCGAC CAAGCTCAAG TTGTTGGGTG TGGATGTCGG CTCGATCGGT
GATGCCCACG GCGCCACCCC TGGCGCGCGC AGCTACCGCT TCATCGACGA GGCCAACAGC
GCCTACCGCC GGCTGGTGGT GGACGCCAGC GGCAAGCATG TGCTCGGCGC GGTGCTGGTG
GGCGACAACA GCTATTACGA CACCCTGCTG CAATACGCCC AGAACGGCAT TGCCTTGCCG
GCCGACCCGG CAGCGCTGAT CTTGCCGCAA GGCGGTGGCG CACCGGCCTT GGGCGCTGAC
GCATTGCCCG ACCGCGCGAC CATCTGCTCC TGCCACAACG TCAGCAAGGG CGCGGTGTGC
GCGGCCATCG ACAGCGGTTG CAGCGATCTT GCGGCGGTCA AGGGCTGCAC CAAGGCTGCC
AGTGGTTGCG GTGGTTGCGC GGCCCTGCTC AAGCAGGTGT TCGAGCATGA ATTGACCGCC
CGCGGCGTGG CGGTGGACAA GAGCCTGTGC GAGCACTTCG CCTACACCCG TCAGGAACTC
TACGGGCTGG TGCGGGTTGA GGGTATTCGC ACCTTCGGCG AACTGCTCGA ACGCCACGGC
AAAGGCCACG TTGGCTGTGA CATCTGCAAG CCGGCGGTGG GCAATATTCT CGCCTCGTGC
TGGAACCAGC CGATCATGGA CCCGGCGCTG GTGCCGCTGC AGGACACCAA CGACACCTTC
ATGGCCAACA TGCAGAAAAA CGGCACCTAC TCGGTGGTGC CGCGCATACC GGGGGGGGAA
ATTACCCCCG ACAAGCTCAT CGTCATTGGC CAGGTGGCCA AGAAGTACGA TTTGTACACC
AAAATCACCG GCGGCCAGCG CATCGACCTG TTCGGTGCCC AGTTGCATGA ACTTCCGCTG
ATCTGGGGCG AGCTGATCGA AGCCGGCTTC GAAACCGGCC ACGCCTACGG CAAATCGACC
CGCACGGTGA AATCGTGCGT GGGCAGCACC TGGTGCCGTT ACGGCGTGCA GGACAGTGTC
GGCATGGCCC TGCGCCTGGA GGACCGCTAC AAAGGCCTGC GCAGCCCGCA CAAGCTCAAG
TTCGCCGTGT CCGGCTGCAC CCGCGAATGT GCCGAGGCGC AGAGCAAGGA CATCGGCGTG
ATCGCCACTG ACAAGGGCTG GAATCTGTAC GTGTGCGGCA ACGGCGGCAT GCGCCCACGG
CATGCTGAAC TGTTCGCCAC CGACCTGGAC GACGAAACCC TGGTACGCCT GATCGACCGC
GTGCTGATGT TCTACATCCG TACCGCCGAC AAGCTGCAGC GCACCTCGGT TTGGCGCGAG
AGCCTGGACG GTGGGCTGGA CTACCTGAAG CAGGTGATCA TCGACGACAG CCTGGGCTTG
GCCAGCGAGC TGGAAGCGCA GATGCAGCAT GTGGTCGACC AGTACGAATG CGAATGGGCC
AACGCCCTCA ACGACCCGGA GAAGCTCAAG CGCTTCCGCA CCTTCGTCAA TGACCGGCGT
GCCGACCCGG ACATGCACTT CGTGCGCGAA CGCGAACAAC GCCGGCCTGC TGCGCCGCTG
CACCTGATTC CAACTGTCGA GGAGGCTGTC TGA
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| Protein sequence | MKATVSSGQR ERLVIVGNGM VGHHCVEQLV SRGALQRFEV RVFGEERQRA YDRVHLSEYF
GGSCAETLAL CEHDFYNANG VHLHLGEAVL EIDRERCEVV TAEGRYGYEQ LVLATGSYPF
VPPIEGSSGN ARLVYRTLDD LDGIRAAAAG ARRGVVVGGG LLGLEAANAL KSLGLEAHVV
EFAPRLMPVQ LDGEGGAALK AQIEALGVGV HLSRATQSIN DGESYRYRMN FDGGEHLETD
LVVFSAGIRP QDALGRACGL EIAARGGVVI DNHCRSSDPR IFAIGECASW NGSVFGLVAP
GYGMARNLAA LLMGEAAVAF TGADMSTKLK LLGVDVGSIG DAHGATPGAR SYRFIDEANS
AYRRLVVDAS GKHVLGAVLV GDNSYYDTLL QYAQNGIALP ADPAALILPQ GGGAPALGAD
ALPDRATICS CHNVSKGAVC AAIDSGCSDL AAVKGCTKAA SGCGGCAALL KQVFEHELTA
RGVAVDKSLC EHFAYTRQEL YGLVRVEGIR TFGELLERHG KGHVGCDICK PAVGNILASC
WNQPIMDPAL VPLQDTNDTF MANMQKNGTY SVVPRIPGGE ITPDKLIVIG QVAKKYDLYT
KITGGQRIDL FGAQLHELPL IWGELIEAGF ETGHAYGKST RTVKSCVGST WCRYGVQDSV
GMALRLEDRY KGLRSPHKLK FAVSGCTREC AEAQSKDIGV IATDKGWNLY VCGNGGMRPR
HAELFATDLD DETLVRLIDR VLMFYIRTAD KLQRTSVWRE SLDGGLDYLK QVIIDDSLGL
ASELEAQMQH VVDQYECEWA NALNDPEKLK RFRTFVNDRR ADPDMHFVRE REQRRPAAPL
HLIPTVEEAV
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