Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1255 |
Symbol | cysM |
ID | 5869015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1402404 |
End bp | 1403342 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546354 |
Product | cysteine synthase B |
Protein accession | YP_001667498 |
Protein GI | 167032267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.152363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00382615 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGGCG CCCCTGCCGT CCGGATTGTG AAATACGCCA TGACCTTGCA GTACCCAACC ATCGCCGATT GCGTCGGCAA TACGCCCCTG GTTCGCCTGC AGCGCATTGC TGGTGAAACC AGCAACACCC TCCTGCTCAA GCTCGAAGGT AACAATCCTG CCGGCTCGGT GAAGGACCGC CCGGCGCTGT CGATGATCAC CCGCGCCGAA CTGCGTGGGC AGATCAAGCC TGGCGACACC CTGATCGAAG CCACATCCGG TAACACCGGC ATCGCCCTGG CGATGGCGGC GGCGATCAAG GGCTACAAGA TGATCCTGAT CATGCCCGAC AACTCCACTG CCGAGCGCAA GGCCGCCATG ACCGCCTATG GCGCCGAGCT GATCCTGGTG ACCAAGGAGG AGGGCATGGA AGGCGCCCGC GACCTGGCCG AGAAGCTGCA GGCCGAAGGT CGTGGCCTGG TGCTCGATCA GTTCGCCAAC GGCGACAACC CAATTGCCCA CTACAACAGC ACCGGGCCCG AGATCTGGCA GCAGACCCAG GGCAGCATTA CCCATTTCGT CAGCTCCATG GGCACCACCG GCACCATCAT GGGCTGCTCG CAGTACCTCA AGGAGCAAAA CCCGGCGGTG CAGATCATCG GCCTGCAACC GATGGAAGGC TCGGCCATTC CAGGTATCCG CCGCTGGCCC GAGGAATACC TGCCAAAGAT CTTCGACGCC ACCCGCGTCG ACCGTGTGGT CGACATGTCG CAGCAGGAAG CCGAAGACAC CACCCGTCGC CTTGCCCGTG AAGAGGGCAT TTTCTGCGGT GTGTCCTCCG GTGGTGCGGT CGCTGCCATG CTGCGCCTGT CCCGCGAAGT GGAAAATGCC GTGATGGTCG CGATCATCTG CGACCGTGGC GACCGTTACC TGTCCACCGG CCTGTTTGAC CCGAGCTAA
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Protein sequence | MIGAPAVRIV KYAMTLQYPT IADCVGNTPL VRLQRIAGET SNTLLLKLEG NNPAGSVKDR PALSMITRAE LRGQIKPGDT LIEATSGNTG IALAMAAAIK GYKMILIMPD NSTAERKAAM TAYGAELILV TKEEGMEGAR DLAEKLQAEG RGLVLDQFAN GDNPIAHYNS TGPEIWQQTQ GSITHFVSSM GTTGTIMGCS QYLKEQNPAV QIIGLQPMEG SAIPGIRRWP EEYLPKIFDA TRVDRVVDMS QQEAEDTTRR LAREEGIFCG VSSGGAVAAM LRLSREVENA VMVAIICDRG DRYLSTGLFD PS
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