Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1187 |
Symbol | |
ID | 5868947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1346151 |
End bp | 1346399 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641546287 |
Product | transcriptional regulator PrtN, putative |
Protein accession | YP_001667431 |
Protein GI | 167032200 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000326709 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.224267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGACA CGCTAGCCCA ACTGCGCAAT CAGTGGACAA CCCCCTGCCC GACGCTAACC GCCGTGCGGG AGCACTACTT TCCTCACATC AAGACTGATC GCCGGTTCAA GGAACTCGTC CAGAAGGGCC AGATCCAGCT GAAGCTTAAA AAGCTGCACA ACTCGCTAAA GGCGCAGCAC GTGATCTACC TGCACGACTT GGCCGATTAC CTGGACCGCC GCGCCGACGA AGCAAAGCAA TCGACATGA
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Protein sequence | MRDTLAQLRN QWTTPCPTLT AVREHYFPHI KTDRRFKELV QKGQIQLKLK KLHNSLKAQH VIYLHDLADY LDRRADEAKQ ST
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