6 homologs were found in PanDaTox collection
for query gene PputGB1_1187 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_1187  transcriptional regulator PrtN, putative  100 
 
 		 82 aa  171  3.9999999999999995e-42  Pseudomonas putida GB-1  Bacteria  decreased coverage  0.000000000000326709  normal  0.224267 
 
 
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NC_007005  Psyr_4605  transcriptional regulator PrtN, putative  44.44 
 
 		 88 aa  75.9  0.0000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
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NC_004578  PSPTO_0570  transcriptional regulator PrtN, putative  43.06 
 
 		 88 aa  74.3  0.0000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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NC_009636  Smed_1680  hypothetical protein  45.28 
 
 		 97 aa  44.7  0.0005  Sinorhizobium medicae WSM419  Bacteria  normal  0.124193  normal  0.187707 
 
 
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NC_009656  PSPA7_2364  hypothetical protein  41.82 
 
 		 94 aa  42  0.003  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
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NC_010725  Mpop_1338  hypothetical protein  32.2 
 
 		 95 aa  40.8  0.006  Methylobacterium populi BJ001  Bacteria  normal  0.622923  hitchhiker  0.000782124 
 
 
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