| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1064 |
|---|
| Symbol | |
|---|
| ID | 5868823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1211431 |
|---|
| End bp | 1212636 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546163 |
|---|
| Product | transporter-associated region |
|---|
| Protein accession | YP_001667308 |
|---|
| Protein GI | 167032077 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC TGCCGTACGC ACCGCTATTC GGCACACTGG CACTGGCCCT GTTGTGGTCA
GCACTGTTCA CCGCCGTGGA TGCCGCCCGC TTGCAACTCA ATGGCACGCA ACGCGCTGGC
GAAGATGGCC AGCCCATGCT GCCAGCCCAG GCCCTGGTGC TGTGTGCCAG CCTGGGCAAA
CTGCTGGTGC TGGGCCTGGC CTGCCTGGTG GGCCAGCGCT ACAGTGGCGA GCACGGCTTC
TGGCTGGCCG GTCTGGCCGC CACCCTCAGC TTGCTGGTGT TCGCCGAATA CCTGCCGCGG
CGCCTGGCCC GGCGCAACCC GCAGGCGTTC GTCAGCCTGG GCACCAGCCT GCTGAAAGTC
CCCCTCGCCC TGCTGCAGCC GCTGGCCTAC CTGCTGGACG GCTTCGCCAA GCTGCTGCTG
CGCCCGTTCC GCGTACAGCC CACAGCCGTG GCCTTGCATG CTCAGGAATC GGATGACTTC
GACGAAGACG AGGAACACGA ACCACCTCGC CACAGCCTGC TCGACGGCCT GCAGTCGCTG
GACAAGGTCA CCGTCAACGA CATCCTGGTG CCACGTAACG AAGTGGACGG CATCAACCTC
GACGAGCCGA TCGAGCGCAT CATCGAGCAG TTGATCGTCA GCCGCCACAC CCGCCTGCCG
GTCTACCACA ACGACATCAA CCAAGTCGAA GCCATCCTCA ACACCAAGCT GATCAGCCAC
CTGCTGCCCA AGGCCGAGCT GACCCTGGAT GCGCTGCACA GCGCCTGCTA CGAACCCTAT
TTCGTACCCG AAAGCACGCC CCTGCAAATG CAACTGCTGA ACTTCCACAA ACAACAACGC
CGCTTGGGCG TGGTGGTGGA CGAGTACGGC GAGGTACTGG GCATCGTCAC CCTGGAAGAC
ATCCTCGAAG AGATCGTCGG CGAGTTCGAG GACGAGCAAA GCCTGGAAAA CCCTCACGTG
CACCCGCAGC CCGATGGCAC CTTCGTCATC GACGGCACGG CTTCGTTACG TGAAATCAAC
CGCACCTTGG GCTGGCACCT GCCCTGCGAC GGTGGGCCGA AAACCCTCAA CGGGCTGGTT
ACCGAAGCGC TGGAAAGCAT CCCGGAGAGC GCCGTTTGCC TGAAGATCGG CCGCTATCGC
CTGGAAATCC TCGAAACAGA GGACAATTGT GCCAGCAAGG TACTGGTGTG GACCGTGACC
CGATAG
|
|---|
| Protein sequence | MDTLPYAPLF GTLALALLWS ALFTAVDAAR LQLNGTQRAG EDGQPMLPAQ ALVLCASLGK
LLVLGLACLV GQRYSGEHGF WLAGLAATLS LLVFAEYLPR RLARRNPQAF VSLGTSLLKV
PLALLQPLAY LLDGFAKLLL RPFRVQPTAV ALHAQESDDF DEDEEHEPPR HSLLDGLQSL
DKVTVNDILV PRNEVDGINL DEPIERIIEQ LIVSRHTRLP VYHNDINQVE AILNTKLISH
LLPKAELTLD ALHSACYEPY FVPESTPLQM QLLNFHKQQR RLGVVVDEYG EVLGIVTLED
ILEEIVGEFE DEQSLENPHV HPQPDGTFVI DGTASLREIN RTLGWHLPCD GGPKTLNGLV
TEALESIPES AVCLKIGRYR LEILETEDNC ASKVLVWTVT R
|
|---|
| |