Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0991 |
Symbol | |
ID | 5868751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1126476 |
End bp | 1127597 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546092 |
Product | glycine cleavage system T protein |
Protein accession | YP_001667237 |
Protein GI | 167032006 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.546351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA CACTGCTCAA GACCCCACTG CATGCCCTGC ACCTGGAATT GGGGGCGCGC ATGGTGCCGT TCGCCGGCTA CGACATGCCA GTGCAGTACC CGCTGGGCGT GCTCAAGGAA CACCTGCACA CCCGCGAGCA GGCCGGCCTG TTCGATGTCT CGCACATGGG CCAGATCATC CTGCGCGGCG CCGATGCCGC CAAGGCCTTG GAAAGCCTGG TGCCAGTGGA CATCATCGAC CTGCCGGTGG GCATGCAACG CTATGCCATG TTCACCAATG AACAAGGCGG TATCCTTGAC GACCTGATGG TGGCCAACCT GGGCGACGAC ACCCTGTTCC TGGTGGTGAA CGCCGCTTGC AAGGACCAGG ACCTGGCCCA CCTGCAAACG CACATCGGCG GCCGTTGCGA GGTGCAGCCA TTGTTCGAGC AGCGTGCCCT GCTCGCCCTG CAAGGGCCGG CAGCGGTCAA GGTGCTTGAG CGCCTGGCCC CGGAAGTGGC CGGCATGACC TTCATGCAGT TCCGCCCGGT GAAACTGCTG GGTGAAGACT GCTTCGTCAG CCGCTCGGGC TACACCGGCG AAGACGGCTA CGAGATTTCG GTACCGGTCC AAGGCGCCGA AGCTTTGGCC CGCCGCCTGC TGGCCGAGCC GGAAGTACAA CCTATCGGCC TGGGCGCGCG CGACTCGCTG CGCCTGGAAG CCGGCCTGTG CCTGTATGGC CATGACATGA ATACCGAGAC CACTCCGATC GAAGCCAGTC TGCTGTGGGC GATTTCCAAA GTGCGCCGTG CCGAGGGTGC GCGTGCTGCA GGGTTCCCTG GCGCCGAGGC AATCTTCGCC CACCAGCGCG AGGGAGTGGC GCGCAAACGT GTCGGGCTGT TGCCACAAGA ACGTACCCCA GTACGTGAAG GGGCGGACAT TGTCGATGCA AACGATAAAC CGGTAGGTAA AGTGTGCAGC GGTGGCTTTG GCCCGACACT CGGCGCCCCT GTTGCAATGG GTTATATCGA GAGTGAACAT GCTGCACTCG ACACCCCCCT GTTTGCCGTA GTACGCGGCA AGAAGGTTGC CTTGAAAGTC AGCAAAATGC CTTTCGTGGC ACAACGTTAC TACCGTGGTT GA
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Protein sequence | MSETLLKTPL HALHLELGAR MVPFAGYDMP VQYPLGVLKE HLHTREQAGL FDVSHMGQII LRGADAAKAL ESLVPVDIID LPVGMQRYAM FTNEQGGILD DLMVANLGDD TLFLVVNAAC KDQDLAHLQT HIGGRCEVQP LFEQRALLAL QGPAAVKVLE RLAPEVAGMT FMQFRPVKLL GEDCFVSRSG YTGEDGYEIS VPVQGAEALA RRLLAEPEVQ PIGLGARDSL RLEAGLCLYG HDMNTETTPI EASLLWAISK VRRAEGARAA GFPGAEAIFA HQREGVARKR VGLLPQERTP VREGADIVDA NDKPVGKVCS GGFGPTLGAP VAMGYIESEH AALDTPLFAV VRGKKVALKV SKMPFVAQRY YRG
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