| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0874 |
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| Symbol | |
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| ID | 5868633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1005070 |
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| End bp | 1007592 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545974 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001667120 |
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| Protein GI | 167031889 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.708566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCT CTTCTTCAGC GGTCGTCATG ACCGATCGCA GCATGGGCAA CGCTCGCGTG
CCTGGTTATC GACGTGCGCT CGCCCTGAGT GCGCTGGCCA TCGCCTTGCT GGGTGCTGGC
GTGCACGCCC AGGCCGCATC CGTCCAGGCG CCACAAGCCT ATAGCATCGC TTCTGGCAGC
CTGGCCCAGG TGCTTGCCCG CTTCGCCAGT GAGGGAGGGT TTACCCTGCA ATATACCTCG
GAGCTGACCC GTGGCCTTTC TAGCCCTGGG TTGCAGGGGC AATACGGTAT CGAGGAAGGT
TTCCAGCATT TGTTGGCGGG CACCGGCCTG CAAGCCGTGC GTCGCGGCAA TAACGTCTAT
GGCCTGCAGC CCTTGCCGCT GAGCGCGGCT TCTGGTGGCG AGGCGCTTAA CCTGGAGCCG
CTGAATATCA ACGGTATCCA GGACAATGCA ACCACCGAGG GCTCGGGCAG CTATACCGCC
AATGCCGTCA CCATCGGCAA AGGCACCCAC CGCCTCAAGG ATATTCCGCA GTCGGTCAGC
GTGGTCACGC GCAAGGCCAT GGACGACCAG CGCCTGGACA CGCTGGATGA AGTGCTGGAA
AAGACCACTG GCATCACCAC CCTGCAGAGC CCATCGGGCG GCAAGTACAT CTACTCCCGT
GGTTTCGAGG TGGAAACCAT TCAGTACGAC GGCGTGCCGC TCGATCGCCG CTACTATGCA
ATCGGCAGCA GCTTCACCTC CGACACCTTG CTGTACGACC GTGTCGAAAT CTTGCGCGGC
GCCAACGGGC TGCTGCAGGG CAGCGGCAAC CCTGGTGCGG CCATCAACCT GGTGCGCAAG
CGGCCGAAAG CCGAGCCTTC GTTGTCGGTA ACCGCCAGCG CCGGTTCGTG GGACACCTAC
CGGCAGACCA TCGACGGCAG TGCCCCGCTC AACGCCGACG GCTCGCTACG CGGCCGCCTG
GTGGCAGGCC ATGAAGACCA GAACTACTTC TACGACACTG CCGAGAGCCG CAAGAACGTA
CTCTACGGCA TCCTTGAATA CGACCTCAGC GACCGCACCA CGGTAGCGGC GGGCGCCAGC
GTGGAAGACC TGCACTCAAC GCCGTTCTTC AGCGGCCTGC CGCGCAACAA GGATGGCAGT
GCGGTCAACG TCAGCCGGTC CACCTACACC GGTGCCGACT GGAACAAGTG GGATAACAAA
CAGACCACCT ACTTCGCCGA TGTTACCCAC GATTTCAACG AAGACTGGCG CCTGAAAGCT
TCTGGCAGCT ACATGCGCGA AACCAACTAC ATCCTCTACA GCTTTGGCCG CGGCGCTGTA
GACCCGGCTA CCGGTAACGG CATGCGTTCG CGTGCCTACC TGTACGACTT CGAAAACATC
AACAAGGGCG GCGACATCAA CCTGACCGGC AAGTGGCGTG CATTTGGCCG CGAGCACGAA
GTGGTGGTGG GGGCCAATGC CAGCGATCTG CAGACTGACG ACCTGCAAGG CGGCTTCATC
AACCTGGGCC CGATGAACAT CTACGACCCG GTTTCGCCAC AGCGCCCGAC CATGGATCAG
CTATTGGGTG CCGAAGGGAC CAACACCTAC CCCGGTACTT CCAAGGCCAA GATCCGCCAG
AGCGGCATTT ATGCGGTGAC TCGCTACAAA CTCAGCGACC CGCTGACGTT GGTGCTCGGT
GGGCGTAGCA GCAACTACAG CTACGACTAT GAGCTAAACC GGTTCAACGG TGTGTCGCCA
ACCCCGGCTC ATTCGCGGGA AAGCGGCGAG TTCACCCCCT ATGGTGGCCT GATCTATGCG
CTGAACGAGC AATGGTCGGC TTATCTGAGC TACGCCGATA TCTTCAAGCC GCAGACCGAG
CTGAGCGTGG ACAACGCGCC GCTGAAACCT ATCGTGGGCT CCAATTATGA GATGGGGCTG
AAGGGCGAAC TGTTCGACGG CCGCGTCAAT ACCAGCTTCG CGTTGTTCCA GGTCGACCAG
GAAAATCGCG CCCAGGCCAC TCTGTGCGGC GATAATGGCG GCGAGAATTG CTACGTAGCG
GGTGGCAAGG TGCGCACCCA AGGTTTCGAT GCCGAAATCA GCGGTGAAGT GCTGGACCGC
ATGCAATTGT TCGCTGGCTA CACCTACACC CATACCGAGT ACCGCAACGA CCCAGCCGAT
GGCGAGTCGG AGGCCGGCGG CACCTTCAAC ACCTATACGC CCAAGCACCT GTTCCGGTTT
TGGGCGGATT ACAACTTGCC TGGCGAACTG GACCCGTGGA CCGTCGGTGC TGGCGCCAAC
ATCCAGAGCC GCAACTACCA CGGCAACTTT GGTGGTACGG ACGGGGTAGG GAAGATCGAG
CAGGCGGGGT ACGCCATCTG GAACGCTCGG GTGGCCTACC AGATCAACAA GAACCTCAGC
GTTTCGTTGA ACGGCAACAA CCTGTTCGAC AAGAAGTACT TCTCCAGCGT CGGTTGGCTG
TATGCGGCCA ACTACTACGG AGATCCGCGT AATTACACCT TGACCCTGCG AGCGGATTTC
TAA
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| Protein sequence | MIRSSSAVVM TDRSMGNARV PGYRRALALS ALAIALLGAG VHAQAASVQA PQAYSIASGS
LAQVLARFAS EGGFTLQYTS ELTRGLSSPG LQGQYGIEEG FQHLLAGTGL QAVRRGNNVY
GLQPLPLSAA SGGEALNLEP LNINGIQDNA TTEGSGSYTA NAVTIGKGTH RLKDIPQSVS
VVTRKAMDDQ RLDTLDEVLE KTTGITTLQS PSGGKYIYSR GFEVETIQYD GVPLDRRYYA
IGSSFTSDTL LYDRVEILRG ANGLLQGSGN PGAAINLVRK RPKAEPSLSV TASAGSWDTY
RQTIDGSAPL NADGSLRGRL VAGHEDQNYF YDTAESRKNV LYGILEYDLS DRTTVAAGAS
VEDLHSTPFF SGLPRNKDGS AVNVSRSTYT GADWNKWDNK QTTYFADVTH DFNEDWRLKA
SGSYMRETNY ILYSFGRGAV DPATGNGMRS RAYLYDFENI NKGGDINLTG KWRAFGREHE
VVVGANASDL QTDDLQGGFI NLGPMNIYDP VSPQRPTMDQ LLGAEGTNTY PGTSKAKIRQ
SGIYAVTRYK LSDPLTLVLG GRSSNYSYDY ELNRFNGVSP TPAHSRESGE FTPYGGLIYA
LNEQWSAYLS YADIFKPQTE LSVDNAPLKP IVGSNYEMGL KGELFDGRVN TSFALFQVDQ
ENRAQATLCG DNGGENCYVA GGKVRTQGFD AEISGEVLDR MQLFAGYTYT HTEYRNDPAD
GESEAGGTFN TYTPKHLFRF WADYNLPGEL DPWTVGAGAN IQSRNYHGNF GGTDGVGKIE
QAGYAIWNAR VAYQINKNLS VSLNGNNLFD KKYFSSVGWL YAANYYGDPR NYTLTLRADF
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