| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0811 |
|---|
| Symbol | |
|---|
| ID | 5868570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 919868 |
|---|
| End bp | 920512 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545911 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001667057 |
|---|
| Protein GI | 167031826 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTG CCCCGACCAC CCTCATCCGC GAAACCTTTC CCGTAGGCCC CTTGCAGTGC
AACTGCACGC TGATTGGCGA CCCATTGACC AAGAAAGCCA TCGTCGTCGA CCCGGGCGGT
GACCCGGACA AGATCCTCGC GCGCCTGCAA GCCCACGGCC TCACGCTGGT AAGCATCATC
CACACCCATG CGCACTTCGA TCACTTCCTG GCCTCGGGCA AGCTCAAGGA GCTGACGGGC
GCCACGTTGC ACCTGCACAA GGACGACCAG GCCCTGTGGG ACAACCTGGA GATGCAATGC
CAGATGTTCG GCGTGCCTTA CACGCCGGTA CCTCCACCCG ATCGCTGGTT GGGCGATGAC
GAAGAGCTGG CCTGTGGCTG TGGTGTGGCC CTGCACACGC CTGGACATAC CCCGGGCTCA
ATGAGCTTCT GGTTCGCCGA CGCCAAACTG CTGATTGCCG GCGACACCCT GTTCCGCCGT
GGCATTGGCC GCACCGATTT GTGGGGTGGT GACCAGCGGG CTATCGTTCG CTCCATCAAG
GAGCGGCTGT ACCGGCTGGA CGAGGAGGCC ATCGTGGTGA CCGGCCACGG GCCTGACACT
CGTCTGGGCG ACGAGATGCG CGAAAACCCC TTCGTGCGTG CCTGA
|
|---|
| Protein sequence | MKTAPTTLIR ETFPVGPLQC NCTLIGDPLT KKAIVVDPGG DPDKILARLQ AHGLTLVSII
HTHAHFDHFL ASGKLKELTG ATLHLHKDDQ ALWDNLEMQC QMFGVPYTPV PPPDRWLGDD
EELACGCGVA LHTPGHTPGS MSFWFADAKL LIAGDTLFRR GIGRTDLWGG DQRAIVRSIK
ERLYRLDEEA IVVTGHGPDT RLGDEMRENP FVRA
|
|---|
| |