Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0542 |
Symbol | |
ID | 5868288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 620911 |
End bp | 621702 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641545630 |
Product | hypothetical protein |
Protein accession | YP_001666789 |
Protein GI | 167031558 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.768311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA TCGATTTAAC GCTTGTCCTG ATACTGGCAC TCGTCGCACT CACGGCCGGC TTTTTCGACG CTATCGCCGG AGGCGGTGGC CTGATCACGC TCCCCGTACT GTTCATCGCC GGTATAGAGC CCTTGGCGGC AATTGCCACT AATAAATTCC AGGCAGCTTC AGCGACGGTT TCGGCTACTT GCGCCTTTGC CCGCAAAGGC ATGATCGACT GGAGACGAGG CAGCTCGATG GCGGTCATGT CGTTTATTGG CGGCGCTCTG GGAGCCTTGT CGATAACGTA TGTGCCCAAA AGCCTTTTAC AGGCATGCGT CCCCCCGCTG CTGATCCTGA TAGCAGCCTA CTTTGCCTTT AGTCCAAGCC CGAATGAACA AGCGCGCAAG GCGAAGATGT CGACTAGCCT GTTTTGTGTG GCGGTTACAC CGTTCATTGG GTTTTATGAT GGAGTATTTG GCCCTGGCGT CGGCTCGTTC TTCATGCTGG CCTGCGTAAT TCTCTTGGGC CAGCACTTGA TACAGGCCGT GTGCACCAGC AAGCTTTTGA ACGCAGCCTG CAACCTGGGC GCACTGTCAG TCTTTTCACT CAGCGGAGCG ATTATCTGGT CGCTGGCGCT GGCAATGGCG CTTGCCGCCT TTCTGGGCGC GCAATTGGGT GCACGCTGCG CAGTTCGTTT CGGCACGAGG CTCATAAGGC TGCTGCTGGT CAGTGTCTGC ATCCTCATGG CACTCAAATT ACTGCTCGAC ACGAGCAATC CACTCGGCGA GTGGCTTAAC CTGTTACTTT AG
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Protein sequence | MIEIDLTLVL ILALVALTAG FFDAIAGGGG LITLPVLFIA GIEPLAAIAT NKFQAASATV SATCAFARKG MIDWRRGSSM AVMSFIGGAL GALSITYVPK SLLQACVPPL LILIAAYFAF SPSPNEQARK AKMSTSLFCV AVTPFIGFYD GVFGPGVGSF FMLACVILLG QHLIQAVCTS KLLNAACNLG ALSVFSLSGA IIWSLALAMA LAAFLGAQLG ARCAVRFGTR LIRLLLVSVC ILMALKLLLD TSNPLGEWLN LLL
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