| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0451 |
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| Symbol | trpD |
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| ID | 5868190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 527870 |
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| End bp | 528919 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545532 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001666698 |
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| Protein GI | 167031467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.34235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AGAGCGCGTT GGCCCGTATC GTCGGCCACC TGGACCTCTC TACCGAAGAA
ATGCGCGATG TCATGCGCCA GATCATGACC GGCCAATGCA GCGAGGCGCA GATCGGCGCC
TTCCTGATGG GTATGCGCAT GAAAAGTGAA AGCATCGACG AGATTGTCGG TGCGGTGTCG
GTGATGCGTG AGCTGGCCGA CAAGGTTGAA CTCAAAAGCC TCGATGGTGT GGTCGACATC
GTCGGCACCG GCGGCGATGG CGCCAATATC TTCAACGTCT CCACTGCTTC CGCGTTCGTC
CTGGCGGCGG CGGGTTGCAC GGTCGCCAAG CACGGTAACC GCGCGGTGTC CGGCAAGAGC
GGCAGTGCCG ACTTGCTGGA AGCGGCCGGC ATCTATCTGA ACCTGACGCC AACCCAAGTG
GCCCGCTGCA TTGACAGCCT GGGCATCGGC TTCATGTTCG CGCAAAGCCA TCATTCGGCG
ATGAAGCATG CCGCTGGCCC GCGTCGCGAG CTGGGGTTGC GCACCCTGTT CAACATGCTC
GGCCCGCTTA CGAATCCGGC CGGAGTGAAG CACCAGGTGG TCGGCGTGTT TGCCCAGGCC
CTGTGCCGCC CGTTGGCCGA GGTACTGCAG CGTCTGGGTA GCAAGCATGT GTTGGTGGTG
CACTCGAAGG ACGGCCTGGA TGAGTTCAGC CTGGCTGCAC CCACCTTCGT TGCCGAACTG
AAGAACGACG AAATCACCGA ATACTGGGTC GAGCCGGAAG ACCTCGGCAT GAAGAGCCAG
AGTTTGCATG GCCTTGCCGT CGACAACCCG CAGGCGTCGC TGGAGCTGAT CCGCGATGCG
TTGGGCCGCC GCAAGACCGA AAACGGCCAG AAGGCTGCGG AAATGATCGT GCTCAATGCG
GGCGCGGCAC TGTATGCCGC CGATCATGCA ATGACCCTGG CTCAAGGTGT GGAGCTGGCC
CACGACGTAC TGCACACCGG GCTGGCCTGG GAGAAGCTGC AGGAACTGGG TGCGTTTACT
GCAGTATTCA AGGTGGAGAA CGAAGCATGA
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| Protein sequence | MDIKSALARI VGHLDLSTEE MRDVMRQIMT GQCSEAQIGA FLMGMRMKSE SIDEIVGAVS
VMRELADKVE LKSLDGVVDI VGTGGDGANI FNVSTASAFV LAAAGCTVAK HGNRAVSGKS
GSADLLEAAG IYLNLTPTQV ARCIDSLGIG FMFAQSHHSA MKHAAGPRRE LGLRTLFNML
GPLTNPAGVK HQVVGVFAQA LCRPLAEVLQ RLGSKHVLVV HSKDGLDEFS LAAPTFVAEL
KNDEITEYWV EPEDLGMKSQ SLHGLAVDNP QASLELIRDA LGRRKTENGQ KAAEMIVLNA
GAALYAADHA MTLAQGVELA HDVLHTGLAW EKLQELGAFT AVFKVENEA
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