| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0178 |
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| Symbol | |
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| ID | 5867875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 194508 |
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| End bp | 196994 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641545259 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666429 |
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| Protein GI | 167031198 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCA AGCCGGTGTT AAACCACACT TTCAGCCCGA ATGATTTTCG ACCAGTCCTG
CAGTCCGCTT ACTTACGCCA TGCCATACGG GCTGCTCTGT TTGGTACCGC CATGGGCCTG
GCAGCTGTTG CGCAACTGTC CGTTGCGGCT GAAACAGCCC AAGTGAGTCA TCACTATGCA
ATACCGGCCG GCCAACTGGC CGATGTATTG AACCAGTTCG CTCGCCAGGC CGGCATCACC
CTGTCCAGTA CGCCTCAGTT GACCGATCGC CTGCAATCCA ACGGCCTGCA GGGGCAATAC
GCCATTGATC ACGCGCTGCG CCAGTTGCTT AATGGCAGCG GGCTGGAAGC TGTCAGCCAG
GACGGACGCA ACTATGTGCT GCAGGCACAG CATCAGGACG CAGCCCTGGC ATTGCCAGAC
ACCGATGTCC GTAGTTTCTC TCTGGGCAAC GCCTTGGGCA GCATGGAGGG TTACAACGCC
ACGCATAGCC AAGTGGCGAC CAAGACCAGC ATGCCACTGG TGGAGACCTC CCAATCGGTC
TCGGTAGTAA CTCGCCAGCA GATGGACGAT CAGGGCTCTC AGACCGTTGC CCAGGCCATG
CGCTACACGC CTGGGGTACT GACCAACCCC TACGGTGCCA CCCATCGCTA CGACTATGTG
GCCATGCGCG GCTTCAACGA CGGCTCGGTG GATAACATCT ACGTCGATGG GCTCAAGTCC
ATGGGCGACA ATGGCACTTA CAGCACCATG CAGGTGGACC CGTACTTCCT TGAGCGCATC
GACATTCTCA AGGGGCCGTC TTCAGTACTC TATGGGCGAA GCTCGCCGGG CGGCCTGGTA
GCCCTTACCA CCAAGAAGCC ACTGTTCACC CCTTACCACC AGGTTCAAGC CACGGTCGGC
ACCCAGGGCC AGCGGGGCAT GGGCTTCGAC TTCAGTGGCC CTGTAGATGA TGACAAGCGT
ATTGCGTATC GCCTGACAGG TTTGGCGGAT GCTTCGGACA CACAGTTCGA CCACAACAAG
GAAGAACGCT ATACCATCGC CCCGGCCATC AGCGTCGACT TCACCGAGGA CACCTCGCTC
ACACTGCAGG CTTACCTGCA GCACGACCCT AACGGCGGGT ACCACGGCGG CAACCCTGCT
GACGGTATGC TGCATAAGCG CAACGGCTTG CGCTTGTCGG ACCACTTTTT CGAGGGTGAG
CCGGGTATCG ATAATTACGA GCGCACCCAG CAGTCCTTCA GCTACCAGTT CGAGCATCGC
TTCAACGATG TGTTCACCGC GCGGCAGAAC TTCCGCTACC AGGATTCCGA CGTGTCCATG
GACCAGGTGT ACTCGGCCGG CTGGGCGGAT GCCGACAGCA ACATTCTCAA CCGCGCCTAT
ACCGGCGGCG ACGAGCGCCT GCATTCGTAC ATCATCGACA ATATGCTGCA GGCGGAATTC
TTCACCGGCG CGGCCAAACA CACCCTGCTG CTGGGCGCCG ACTACCAGCG ACGCAAAGCC
GATGTCGCAT GGCGCTATGG CACGGTCGAC CCGCTGGACG CCGGCAACCC GCAATACGGT
AATGGCAACC TTCAGGTACT GGGCGAAAAC CGCTACCAGC GGCGCTTGCA GCAAACAGGT
GTGTATCTGC AGGACCTGGT GGAGGTCGAC CAGTGGCGAT TGTCCCTTGG GCTTCGCCAG
GACTGGGTGA AGGTGTCCGA GGAGAATCGC GACAGCGACA CCAAGGTCAG CGATCAGCGC
TCCAGGTTTA CTACCCGGGC CGGGGTGCTC TACCTGTTCG AGAATGGCAT TGCGCCTTAT
GTCAGCTACT CGGAGTCGTT CAATCCCAAT ACCGTGTCCG ACCAGCAAGG CCGCCCGCTG
GCACCGACCG AGGGCACTCA GTGGGAAGCC GGCATCAAGT ATCAGCCTCC GGGCAGCGAC
AACCTGTTTA CCGCATCGGT GTTCCGTATC GAGCAGGAAA ACCTGGCTTC GAAGCAGCCT
GACGAAAACT TTTATCGCCC GGTAGGTGAA GTACGCTCGC AAGGGCTGGA GCTAGAGGCT
CATGTGCAGC TGAGCGACAG CCTGAAACTG CTGGGTGGCT ATACCTTCAC CGATATCGAG
TACGCCAAGT CGATGCCGAG CCTGGTGTCG GCCAGCCTGG ACAATGAAGG CAACGCGCCA
ACCCAGGCAC CGAAACAGAT GTTCTCGCTG TGGGCTGACT ATAACTTCCA CCAAGGGGCT
CTGGATGGAC TGCGGCTGGG CGGTGGGGTG CGATATGTGG GCTATAGCTG GGTGGATGCG
GAAAACAGCA TGAAGGTGCC TTCCTACACC CTGTTCGACG CTTCGATCGG CTATGACCTG
GGGAAGGTGG GTCTGACGGG TGTGGATGTG CGGCTGAACG CAAACAACCT TACCAATGAA
AGCTACATTA CCTCATGTGC CAGCCTGAAC TACTGCTACA TGGGTGAAGA GCGCAATGTG
AGCGCTACGG TCAGCTATCA GTTTTGA
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| Protein sequence | MFIKPVLNHT FSPNDFRPVL QSAYLRHAIR AALFGTAMGL AAVAQLSVAA ETAQVSHHYA
IPAGQLADVL NQFARQAGIT LSSTPQLTDR LQSNGLQGQY AIDHALRQLL NGSGLEAVSQ
DGRNYVLQAQ HQDAALALPD TDVRSFSLGN ALGSMEGYNA THSQVATKTS MPLVETSQSV
SVVTRQQMDD QGSQTVAQAM RYTPGVLTNP YGATHRYDYV AMRGFNDGSV DNIYVDGLKS
MGDNGTYSTM QVDPYFLERI DILKGPSSVL YGRSSPGGLV ALTTKKPLFT PYHQVQATVG
TQGQRGMGFD FSGPVDDDKR IAYRLTGLAD ASDTQFDHNK EERYTIAPAI SVDFTEDTSL
TLQAYLQHDP NGGYHGGNPA DGMLHKRNGL RLSDHFFEGE PGIDNYERTQ QSFSYQFEHR
FNDVFTARQN FRYQDSDVSM DQVYSAGWAD ADSNILNRAY TGGDERLHSY IIDNMLQAEF
FTGAAKHTLL LGADYQRRKA DVAWRYGTVD PLDAGNPQYG NGNLQVLGEN RYQRRLQQTG
VYLQDLVEVD QWRLSLGLRQ DWVKVSEENR DSDTKVSDQR SRFTTRAGVL YLFENGIAPY
VSYSESFNPN TVSDQQGRPL APTEGTQWEA GIKYQPPGSD NLFTASVFRI EQENLASKQP
DENFYRPVGE VRSQGLELEA HVQLSDSLKL LGGYTFTDIE YAKSMPSLVS ASLDNEGNAP
TQAPKQMFSL WADYNFHQGA LDGLRLGGGV RYVGYSWVDA ENSMKVPSYT LFDASIGYDL
GKVGLTGVDV RLNANNLTNE SYITSCASLN YCYMGEERNV SATVSYQF
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