Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0135 |
Symbol | |
ID | 5867823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 137521 |
End bp | 138477 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545208 |
Product | periplasmic solute binding protein |
Protein accession | YP_001666387 |
Protein GI | 167031156 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.972392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACGT TATTATGTTA CCTGTTTCTG ACGACTCGAG TATCCACCGT GTCCCGATTC CTAGCTCTGT TTGTCGCTTT CATTGCATTT TCCGCCCAGG CCGATGTGCG CGTGCTCACC AGTATCAAGC CCCTGCAGCA GATTGCCGCT GCCGTGCAGG ATGGCATTGG CAGCCCTGAC GTCTTGCTGC CACCAGGCGC TTCGCCGCAC CACTACGCGC TGCGCCCGTC CGATGTACGG CGGGTGGGTG ATGCCGACCT GCTGTACTGG ATCGGCCCGG ACATGGAGAA CTTCCTGCCG CGTGTCTTGG CTAGCCGCAG CAAGGCCACC GTGGCCGTGC AGTCGCTGAC GGGCATGAAG CTGCGTCACT TTGGCGAGGA CAGCCACTCC CATGAGGAAG AAAGCCACGA CGACCATGAC CATGATCACC GGCCGGGCAG CCTGGATGCG CACTTGTGGC TATCGTCGGT CAATGCGCGG GTAATCGCGG CAAAAATGGC GGCTGATCTG GCCCAGGTCG ACCCGGCCAA TGCGGCTCGC TACCAGAGCA ACCTGAAGGC CTTCGACGAG CGTCTGGATG CACTGGATGC GCGTATCAAG GCGCGGGTGG ACGGTATTGC CGGCAAACCT TATTTCGTGT TCCACGAAGC GTTCGATTAC TTCGAGGCTG AATATGGTTT GAAGCACACC GGCGTATTCA GCGTGGCGTC CGAGGTGCAG CCTGGGGCGC AACATGTGGC GGCCATGCGC AAGCGCCTGC AGGAAGTGGG CAAGACCTGT GTGTTCAGCG AGCCGCCACT GCGACCGCGC TTGGCCGAGA CCTTGACCGC CGGGCTGCCG GTGCGCCTGG CCGAGCTGGA TGCGCTGGGC GGAACAGACC CGGTGGATGG CAAGGGCTAT GAGCGCTTGC TGGAAAAGCT GGGCGGCGAC CTGGCTGGGT GCCTGGAACA GCTCTAA
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Protein sequence | METLLCYLFL TTRVSTVSRF LALFVAFIAF SAQADVRVLT SIKPLQQIAA AVQDGIGSPD VLLPPGASPH HYALRPSDVR RVGDADLLYW IGPDMENFLP RVLASRSKAT VAVQSLTGMK LRHFGEDSHS HEEESHDDHD HDHRPGSLDA HLWLSSVNAR VIAAKMAADL AQVDPANAAR YQSNLKAFDE RLDALDARIK ARVDGIAGKP YFVFHEAFDY FEAEYGLKHT GVFSVASEVQ PGAQHVAAMR KRLQEVGKTC VFSEPPLRPR LAETLTAGLP VRLAELDALG GTDPVDGKGY ERLLEKLGGD LAGCLEQL
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