Gene Ppro_3466 details

Gene Information

• Locus tag: Ppro_3466
• Symbol: aksA
• ID: 4572494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3828454
• End bp: 3829623
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639757525
• Product: trans-homoaconitate synthase
• Protein accession: YP_903116
• Protein GI: 118581866
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGAAC AGGCAGGCAG CACGAATATC ATTATCGACG ACACCACCCT GAGGGACGGA 
GAACAGACCG CCGGCGTGGT CTTCAGCAAA CGGGACAAGA TCGCCATAGC ACGCATGCTG 
GATTCCATCG GTGTCCAGGA ACTGGAATGC GGCATTCCGG CCATGGGAAG GGAAGAACGC 
GAAGGGATCA GGGCACTGGT TGACCTGGGG CTCAATGCCC GCCTGATCGC CTGGAACCGG 
GCGCTGGTCC CCGATATCCA GGCCAGCATC GACTGCGGCA TATCGGCGGT GGATATCTCG 
CTGCCGGTAT CGGACATCAT GATTCGCAAC AAGATCCGCA AGAGCCGCTC CTGGGTACGG 
GAACAGCTCA AAACAGCGCT GGGCTTTGCC AAGCAGCACG GCTTGTACGT ATCGGTGGGG 
GGCGAGGACG CCAGCCGCGC CGACCATGCC TTTCTGGTGG AGTTGATGCG CATAACACTG 
CAGATGGGGG GAGACCGTTT CCGCTTCTGC GACACCCTGG GGATCCTCGA CCCCTTCGGC 
ATGTACGACA GGATACGCGC CCTGCGTGAG GCGGTGCCGG AACTGGCCAT CGAGGTGCAT 
ACCCACAACG ACTTCGGCAT GGCCACCGCC AACACCATCG CCGGTATCCG CGCCGGCGCC 
ACCTTTGCCA ATACCACCGT GAACGGCTTG GGAGAGCGGG CCGGCAATGC CGCCCTTGAG 
GAGGTGGTCA TGGGTCTCAG GCACGCCTGC GCTATGGATA CCGGTATTGC CAGCCATCGT 
TTCCGCGAGC TGTCGCTCTT CGTTTCCCGG GCCTCCCGCC GCCCCCTGCC CCCCTGGAAG 
GCAGTAGTGG GGGAGTCGGT CTTTGCCCAC GAGTCAGGCC TGCACACCGA CGGGGTGCTT 
AAAAATCCGT CAAACTACGA GGGATTCGAC CCGGCAGAGG TGGGGTTGAG CCGCAGCATC 
GTCGTCGGCA AGCACTCCGG CAGTAGCGGC CTGATCGACC GCTACCGCGC CATGGGTATC 
GCCGTCAGCC GTTCAGAGGC TACCCGCCTG GTGGAAAGGG TCAGGAGAGT CGCCCAGAGG 
ACCAGGCGGC CGCTCACTAA CGAGCAGTTG CTCAGACTGT ACGACGGCAG AGGGGCGGAA 
ATCCCCGCAA ACAGTTTCTG TGTCTGCTGA 

 

Protein sequence

MREQAGSTNI IIDDTTLRDG EQTAGVVFSK RDKIAIARML DSIGVQELEC GIPAMGREER 
EGIRALVDLG LNARLIAWNR ALVPDIQASI DCGISAVDIS LPVSDIMIRN KIRKSRSWVR 
EQLKTALGFA KQHGLYVSVG GEDASRADHA FLVELMRITL QMGGDRFRFC DTLGILDPFG 
MYDRIRALRE AVPELAIEVH THNDFGMATA NTIAGIRAGA TFANTTVNGL GERAGNAALE 
EVVMGLRHAC AMDTGIASHR FRELSLFVSR ASRRPLPPWK AVVGESVFAH ESGLHTDGVL 
KNPSNYEGFD PAEVGLSRSI VVGKHSGSSG LIDRYRAMGI AVSRSEATRL VERVRRVAQR 
TRRPLTNEQL LRLYDGRGAE IPANSFCVC