| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3301 |
|---|
| Symbol | |
|---|
| ID | 4572590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3637882 |
|---|
| End bp | 3638595 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639757359 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_902951 |
|---|
| Protein GI | 118581701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGA AACTTGAGAT GTTGGAGCAA CTGCAGGAGA TCGACACTCA GATCGATGTG
CTGAAAAAGG CCCAGAGCGG TTTGCACGCC GAGTTGAACG TCATCGAGCA GGGGCTTGAC
GTCGCCCGCG AGGAGCTGGC CGAACTGAAT ACCCAGGTCG CCCAGCTGAC GGAGGAAAAA
CAGGAACTTG AGACCGGCCT TATCACGGAG CAGGACAATA TCCAGCGTTC CGAAACCAAC
ATGAAGGAGA TCAAGACCAA CAAGGAGTTC CAGGCTGTCG GGCGCGAGAT CGCCAGCGCC
CGCAAGCTGA CCGCCGAGCT GGAAGAGCAG ATTCTGCAGA AGGTGGCCAA GGTGGATGAA
TTGAGCGCTG AGATCGCCGC CAAGTCCGCC CTGCTTGCGG AGCTGGAGCA GAATTCCTCC
CAGCGCCGCG ATGAGAAGCA GTCAGAGGTC AATGCCTTGC AGAAGGATAT CGATGCCGAT
ACTGCCCGTC GCGAGGCGAT CACCAAAGAG CTGCCCGTTA CCCTGATGAA GCGCTACACC
AAGCTTCGCC AGCAGCGTAG CGGCCAGGCG GTTGCCTTTG CCCGTGACGG CTACTGCCTG
GGGTGCAACA TGAATCTCCC TCCCCAGCTC TTCAACACCC TCTACCGGGC CGATGAGCTG
ATCAGCTGCC CCCACTGCCA GCGGGTGCTG ATCTTGAAGC TGAATCAGGG CTAG
|
|---|
| Protein sequence | MKKKLEMLEQ LQEIDTQIDV LKKAQSGLHA ELNVIEQGLD VAREELAELN TQVAQLTEEK
QELETGLITE QDNIQRSETN MKEIKTNKEF QAVGREIASA RKLTAELEEQ ILQKVAKVDE
LSAEIAAKSA LLAELEQNSS QRRDEKQSEV NALQKDIDAD TARREAITKE LPVTLMKRYT
KLRQQRSGQA VAFARDGYCL GCNMNLPPQL FNTLYRADEL ISCPHCQRVL ILKLNQG
|
|---|
| |