Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2475 |
Symbol | |
ID | 4573997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2678810 |
End bp | 2679661 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639756525 |
Product | polysaccharide export protein |
Protein accession | YP_902138 |
Protein GI | 118580888 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | [TIGR03027] putative polysaccharide export protein, PEP-CTERM sytem-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.169122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTGA TACCGCTGTT TCTGATGCTG CTGCTGGCGC TTCCGCTCTC CTGCCACGCC GCGGATTACG TGATCGGCGA GGGGGATGGA CTGGATGTTG CTGTCTGGGG CGTCAAGGAA CTGACCTTTT CGGTCAGGGT CCGTCCGGAT GGTAAGATCA CCGTGCCCGG CCTGGGTGAC CTTTCCGCCA GCGGGCAGAC ACCGACCGAG CTGCAGAAAA GCCTGACGGA AAAGCTTAAG GATCTGGTGA AGAACCCGAT AGTAACCGTA ACCGTGCGCG AGATAACCAA CAGCAAGGTG TATATTTTCG GGAGTGGAAT AAATTCAGGG GTATACGATC TCAACCGGCG CACCTCACTC TTGCAGCTCC TCTGCTCCAT CGGCAGCCAG GCCTCCGTGG ATTCCACGTC AGCGGCGGGT TCAGCGGGTG GAGCCACCTC GAAAGTAGCC GATTACAAGC GCGCCTATGT GCTGCGTAAC GGCAAAAAGA TCAAGGAAAA CTTCTACCGC CTGTTCATCG ACGGCGACAC CTCTGAAGAT GTGATCATCG AATCCAATGA CTCCATTTTC GTTCCCCAGC TCCTGGACCG GAATATTTAT GTTCTCGGCG CGGTGGCAAC GCCGCGCGCC CTCGAATACC GCGAGGGGAT CAAGGTGATG GAGGCGATTC TGGAGGCGGG TGGCTTCACC AAGTTCGCCG ATCAGAACGA CGTCATCATC CGCAGGAAAG AGGGGACAAA GGATGTGGCC CTCGAGGTGA AGGCAAAGAA ACTGATCAAG GATGGCGACC TGACCCAGAA CGTGCCTCTT CGGCCGGGAG ACTACGTCGT GGTCAGGGAG AGCATCTTCT GA
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Protein sequence | MRLIPLFLML LLALPLSCHA ADYVIGEGDG LDVAVWGVKE LTFSVRVRPD GKITVPGLGD LSASGQTPTE LQKSLTEKLK DLVKNPIVTV TVREITNSKV YIFGSGINSG VYDLNRRTSL LQLLCSIGSQ ASVDSTSAAG SAGGATSKVA DYKRAYVLRN GKKIKENFYR LFIDGDTSED VIIESNDSIF VPQLLDRNIY VLGAVATPRA LEYREGIKVM EAILEAGGFT KFADQNDVII RRKEGTKDVA LEVKAKKLIK DGDLTQNVPL RPGDYVVVRE SIF
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