Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2377 |
Symbol | |
ID | 4573140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2579781 |
End bp | 2580974 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639756427 |
Product | phage integrase family protein |
Protein accession | YP_902041 |
Protein GI | 118580791 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.101211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAT TATCGGCAGC AGTTGATTTG CAGCTCTTTG ACAAACCGAA AAACGAGGGA CGCATCGCCA AGAAGAGCGG TTCGAAAAAG CTCTACCTTG ATTTCCATTA TCATGGCGTT CGCATCGAGA AGAGCACCGG CCTCGATGAC ACCTTGGCAA ACCGCCACAA GGCAGAGGCC ATGCTGGAAA AAATTCTTGA GATGAAACGG GAAGGAACAC TTGAGTTTGC CAGGCTCTTT CCCGGCGCCA GCGAGTCGGA GAAGGAATTT CACACCCGGC TGGAAAAGGG GGAGTACTCC CCTACCCCGA AGGCGGTCAC GTTCAAGGCG TACGTTGCGA AATGGTACGC AACGCTCTGG GTAAACTATC CATCTGCGAC GAAAAAGAAG GACTTCCAAT CAGTGATCGA TTACTGGCTG TTACCGTTCT TCGGTGACAT GACCTTCCAC CACATCACCG GTGTGACGTT GCAGGAGTTC ATAGCCACCT TGAATCACCG GGAGGGGAAA AAAGTCGGGC AGCCCTTGGC CCGGTCAACC ATGGTGAACA TCCTCCAGAT TTTCAGGACG ATCTGGACCG ATGCGGTGGT TGCGCATCGC TGGATGATCT TCGATCCCAT GATGGCCATC AAAAAGCATC TCCCCAAGAA GGGGAAAAAG AAGGTGGAGG TCTTCCGCTT CCATGAGTGG CAGGAGCTTC TCGCCGGCAT GGATGCCAAT TACCGGCCGG TGGCGAAACT GATGGTCCTG ACCGGGCTCA TGGCGAGCGA GATAGCCGCT CTCAAGCCAC GGCACATCCG GGATGGCCAT CTGTACATCG AAGAGTCGAT TGTCAGGAAG GTCGAAAAGG ATGACTTGAA AACCAGTTAC CGGGAAAGGA GGATTCCCAT AACCGGGGCA ATCGGTGAGA TCCTCGACCA TGCCCTAAAA ACGGCCCGGA GAGGATATCT TTTTACCATG GAGAACGGCA GTAACTTCTC GGCAGAGCTG TTTCAAAGAC GGGTATGGGT CCCGGCCATG AAAGTGTCAG GAGTTTCTTA CCGCAAGCCC TACTCCACCC GGCACACCTT TGCTGCTTGG GCCTTGGCTA TCGACTGCGA TCGGAACCGT CTTGTTGCTT TGATGGGACA CGCAAGCAAG CAGATGTCAG GAGGCGCTGG CTTTGGCACT GTGGGCAAAG GATGCGGGAT ATAG
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Protein sequence | MAGLSAAVDL QLFDKPKNEG RIAKKSGSKK LYLDFHYHGV RIEKSTGLDD TLANRHKAEA MLEKILEMKR EGTLEFARLF PGASESEKEF HTRLEKGEYS PTPKAVTFKA YVAKWYATLW VNYPSATKKK DFQSVIDYWL LPFFGDMTFH HITGVTLQEF IATLNHREGK KVGQPLARST MVNILQIFRT IWTDAVVAHR WMIFDPMMAI KKHLPKKGKK KVEVFRFHEW QELLAGMDAN YRPVAKLMVL TGLMASEIAA LKPRHIRDGH LYIEESIVRK VEKDDLKTSY RERRIPITGA IGEILDHALK TARRGYLFTM ENGSNFSAEL FQRRVWVPAM KVSGVSYRKP YSTRHTFAAW ALAIDCDRNR LVALMGHASK QMSGGAGFGT VGKGCGI
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