| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2242 |
|---|
| Symbol | |
|---|
| ID | 4575001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2422521 |
|---|
| End bp | 2423867 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639756290 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_901907 |
|---|
| Protein GI | 118580657 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00131552 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA ACAACACACC CGGCCTCTGG GACAGGGACC AGGGGGAATC CACGGCCGCC
CCCTCCGCCA ACGCCCCCCT GGCCGAACGG ATGCGGCCGC GCACCCTGAC GGAGTTCACC
GGCCAGGAAC ATCTGGTGGG CGAGGACCGC ATCCTGCGGC GCATGATCGA GACCGACACC
CTCTCCTCGC TGATCTTCTG GGGACCTCCC GGATGCGGCA AGACCACCCT GGCCCATGTC
ATCGCCCGGG AGACACGGGC GCACTTCATC TTCTTCTCGG CCATCCTGTC CGGCATCAAG
GAGATCAGGG AGATCTTCCG CGAGGCCGAG GGGGTGGCCA GCCGTGGCCG GCGCACGATC
CTGTTCGTGG ACGAGATCCA TCGCTTCAAC AAATCCCAGC AGGACGCCTT TCTCCCCTAT
GTGGAAAAAG GGGTAGTCAC CATGATCGGC GCCACCACCG AGAACCCCTC CTTCGAGGTC
ATCGCCCCGC TGCTCTCCCG CTGTCGCGTG CTGACCCTGA AACAACTGGA GCCGTCCACC
ATCGCGGGGC TCATCGGCCA GGCACTGGCC GACCGGGAGC GGGGACTGGG GGAACTGGGG
CTAGACATTT CCGAAGAAGG GCTGGACTTC CTGTCCCGGC AGGCCGGCGG CGACGCGCGC
GTGGCCCTGA ACACCCTGGA GGTCGCGGCG GGCCTGGCCC GGGAGAGGCT GATCTCCCTG
GAGACGGTCC AGGAGGCGCT GCAGAAGAAG GCGCTCCTGT ACGACAAGAG GGGCGAAGAG
CACTACAACG TGATCTCCGC TTTCATCAAG TCCATGCGCG CCAGTGACCC GGACGCGGCC
CTGTACTGGC TGGCCCGCAT GCTGGAGGCG GGAGAGGATC CGGTCTTCAT CCTGCGGCGC
ATGATCATCC TGGCGTCGGA AGACATCGGC AATGCCGACC CGCGCGCCCT CCAGCTGGCT
GTTTCAGCCC TGCAGGCCTT CCAGGTGATC GGCATGCCCG AGGGGCGCAT AATCATGGCC
CAGGCGGTCA CCTATCTGGC CACCGCCCCC AAGTCCAACG CCTCCTACCT GGGCATCGAC
GCTACCCTGG CCGAGGTCAG GAAGAGCGGC GGCCTGGGGG TGCCGATGCA TATCCGCAAC
GCCCCCACCA CGCTGATGAA GGACCTGGGC TACGGCAAGG GGTACCAGTA CGCCCACGAC
TATGCCGAAG GGTATGCCGG CCAGCCCTGC CTGCCGGACG AACTGGCCGG ACGCACGTTC
TACGAACCAA AGGGGTATGG ATACGAGAAG AGCATCGTGG AACGCATGGA GTGGCTGAAG
AGGATCAAGG AGGAAAGAAA AAAATGA
|
|---|
| Protein sequence | MKQNNTPGLW DRDQGESTAA PSANAPLAER MRPRTLTEFT GQEHLVGEDR ILRRMIETDT
LSSLIFWGPP GCGKTTLAHV IARETRAHFI FFSAILSGIK EIREIFREAE GVASRGRRTI
LFVDEIHRFN KSQQDAFLPY VEKGVVTMIG ATTENPSFEV IAPLLSRCRV LTLKQLEPST
IAGLIGQALA DRERGLGELG LDISEEGLDF LSRQAGGDAR VALNTLEVAA GLARERLISL
ETVQEALQKK ALLYDKRGEE HYNVISAFIK SMRASDPDAA LYWLARMLEA GEDPVFILRR
MIILASEDIG NADPRALQLA VSALQAFQVI GMPEGRIIMA QAVTYLATAP KSNASYLGID
ATLAEVRKSG GLGVPMHIRN APTTLMKDLG YGKGYQYAHD YAEGYAGQPC LPDELAGRTF
YEPKGYGYEK SIVERMEWLK RIKEERKK
|
|---|
| |