| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2189 |
|---|
| Symbol | |
|---|
| ID | 4574155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2361624 |
|---|
| End bp | 2362817 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639756237 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_901855 |
|---|
| Protein GI | 118580605 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0726019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG CGGATCGCGT GCACAGAATC CAACCATCAC CCACGCTTGC CATAGATGCA
AAAGCAAAGG CCCTCAAGGC TCAAGGAGTC GATGTGATCA GTTTCGGCGC CGGAGAGCCT
GACTTCGACA CCCCCGACGC CATCAGGGAT GCGGCCAGGA ACGCCATCGA CTCCGGTTTC
ACCAGGTACA TGCCGGTGGG AGGCGCCGAC GACCTGAAGG ACGCCATCAT CCTCAAGATG
AAGCGGGACC ACGGTATCGA ATACAGCCGT GCCGAGATCT GCGTCTCCTG CGGCGCCAAG
CACAGCCTGT ACAATATCTC CCAGGCCCTG ATCCAGGAAG GGGACGAGGT CATCATCCCG
GCCCCCTACT GGGTCTCCTA TCCCGATCAG GTGGTGCTGG CCGGCGGGAC ACCGATTTTT
ATCCAGACCG ATGAGAAGTC GGATTTCAAG ATCACCCCCC GGCAGTTGGA AGCGGCCATC
ACCCCCCGCA CCAAGGCCAT GATTCTCAAC TCCCCCTGCA ACCCCACCGG CACCAGCTAC
ACCGGGGAAG AGCTGCGGGC CATCGCCCAG GTCTGCCTCG CCCATGACTT CATCATCATC
TCCGACGACA TCTACGAGCG GCTGATCTAC GACGGTCAGG TTTTCAGCAA CATCGTCCAG
GTGGCACCGG AACTGAAGCA GCGGGTTGTC CTGGTTAACG GCGTGTCCAA GACCTACGCC
ATGACCGGCT GGCGCATCGG CTACGCCTGC GGCCCGCAGG AACTGATCGC CGCCATGACC
AAGATGCAGT CCCAGTCAAC TTCCAACGCC TGTTCCATAG CCCAGAAGGC TTCCGTCGAG
GCCATTGCCG GTTCCCAGGA AAAGGTGACC GCCATGGTTC AGGAATTTGA AAAACGCCGT
ACCTATATCG TGCAGCGGTT GAATGCCATG CCGGGAGTCA CCTGCTTCAA TTCCACCGGC
GCCTTCTATG CCTTCCCCAA CTTTTCCGCC CTCTATGGCA AGAGCTTCAA CGGAAAGATC
ATTGCCAGCT CCACCGATCT AGCCGATTAT CTGCTGGAGG AGGCCAAGGT GGCGTTGGTT
CCGGGGGTCG CCTTTGGCGA CGACAGGTAT GCCCGGCTCT CCTATGCCAT CGGCCTGGAG
AGTATCGCCG AGGGCATGGA TCGTCTCGAA CGGGCGATCC AGAACCTGAA ATAG
|
|---|
| Protein sequence | MKLADRVHRI QPSPTLAIDA KAKALKAQGV DVISFGAGEP DFDTPDAIRD AARNAIDSGF
TRYMPVGGAD DLKDAIILKM KRDHGIEYSR AEICVSCGAK HSLYNISQAL IQEGDEVIIP
APYWVSYPDQ VVLAGGTPIF IQTDEKSDFK ITPRQLEAAI TPRTKAMILN SPCNPTGTSY
TGEELRAIAQ VCLAHDFIII SDDIYERLIY DGQVFSNIVQ VAPELKQRVV LVNGVSKTYA
MTGWRIGYAC GPQELIAAMT KMQSQSTSNA CSIAQKASVE AIAGSQEKVT AMVQEFEKRR
TYIVQRLNAM PGVTCFNSTG AFYAFPNFSA LYGKSFNGKI IASSTDLADY LLEEAKVALV
PGVAFGDDRY ARLSYAIGLE SIAEGMDRLE RAIQNLK
|
|---|
| |