| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1642 |
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| Symbol | |
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| ID | 4572003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 1758808 |
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| End bp | 1761486 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639755686 |
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| Product | putative rRNA methylase |
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| Protein accession | YP_901315 |
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| Protein GI | 118580065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0106541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCACC GAAGCTTTCA CAGCCGCCTC TTCGCCTTTA TCGCCCGGCA TCCCCGCCTG
ATACTGGGAG TGGCGCTGCT GCTCTCCGTC ATTTCGGTCA TCTACACCAA ACAGAACATG
GAGTTCCTCA CCGGCCGCGA CGACCTGATG CCCAGGAACG CTGCCTTCCA GGTGGACTAC
CGCGCCTACC GCCAGGAGTT CGGCGACCAA GAAGAGGTGG TCATCGTGGT GGAGTCGGAC
GACGCCGAAC TGTCCACCCG CTGCGCTGAC GCCATCTACC AGCGACTCTC CCGTGAAAAG
GGGGTCTATC GCGAGCTGTT CTATCCCGGC GGCCTGCCCT ATTTCCGCAA GAATGGCCTT
TTGTTCATGC CGCTGGAGGA GATCAGGAAC CTGCGCTCCA CCCTGACCAT GGCTGCGCCG
GTGCTGAAAG ACCTGGCCGC CTCCCCCACG GTGCAGACAC TGTTCACCAG CCTGACCAGC
CAGATCGACG TCTACCTGGC GACCGGCGAC CAAGATTCCC TGAAGAGTCT GACCTTTATG
CTCACTACCC TCGACAAGGG CTTCAAGGCC TTCGACGGGA AGTCCAGTGG CCTGAGCATG
GACTCGTTTC TCAAGGGGAG CACTGACGGC AAGGGTTCCC TGCTGGAGAG CGCCGGCAAA
CAGCAGGTGA TCACCATCCT GCCGGTCAAG GAGCAGGGAA GCTTCGTGCC GGCTGAGAAG
GCCATCACCA CCACCCGCGC CATACTGCGC CAGGTCATGG CCAGACCGGA TTTCAAGGGG
ATCAACGCCG GCCTGACCGG CGTTCCGGTG CTGGAGTACG AGGAGATGGC AACCAGCCAG
CACGACATCG CCATCGCCAC GGTGCTGTCC CTGTCGCTGA CCGTGGTCCT GCTGCTGTTC
GCCTTCCGCG GGCTCTTGAA CGTGATCAGC GCCATGGTGT CGCTGATCGT GGGCATCTGC
CTCTCCTTCG GTTTTGCCAC GGCCGTGATC GGCCACCTCA ACATCCTCTC CATGGTTTTC
GCCATCATGC TGATCGGCCT GGGTATCGAG TACGGCATCC AGGTGGTGCT GCGCTACCAG
GAGGAACTGA GGGGCGGCGC CGACGGCATG CAGGCAATCG AGACCGGCCT GGGGGCAAAC
ATGCGCTCCA TCGTCATGGC TGCCGCCACC GTTGCCCTGG CCTTTGCCAC CTTTGCCTTC
ACCGATTTCA AGGGGATCGC CGAACTGGGC ATCATCGCCG CCGGTGGGGT AGTGATCTGC
GTCCTGGCCA CCTTCAGCGT ACTGCCGGCC ATGCTGATCC TGCTGGAGCG TTTCAGGAAA
CCGGCAAAGC CCTACCTGGC CGTTCCGGAC GGCGACCGGG AGGTCCAAGT GGCCGGGCGC
CCGCTGTTCC GTGCCCTGCT GGACCGGCCG CGCATGGTTG CCGGCATGAC CCTGCTGCTG
TCGCTCATCT GCGTCTATCC CGCCATCGAC ACCCGGTTCG ACTACAACCT GATGAACCTG
CAGGCCAAGG GGTTGCAGTC GGTGGAATAC GCTTACAAGC TGATGCGAAG CAAGGAGAAC
TCCGGCTATT TCGCCGTGGT CATGGCCAAA GACCGGCAGG AGGCGCAGCA GCTTACCCGA
CGGCTGGAGC AACTCCCCAG CGTGGACCAC GTGGTCAGCC TGGATGCCCT GGTTCCCGAC
CAGCAGGAGG CCAAGCTGGC CGAGCTGGCG GAACTGAAGA GGGTCATGGA CCAGGTCAGG
CCGGTCCCCT ACGAGGAAAA CCTGGCCCTG ATGGAGCTGC CCATGGTATT CGAGAACTTC
CACGACCGGG TGGCGAAGTT GAAGCAGGCC CTGGAGAAAG CCGGGGCAGC GGAAGCACGA
CCGGTGGCCG CCTTCCTGAC AACATTGGAC GGCTTCTTCG CCTCCCTGGA AAAGGAGAAG
GACAGGAATG CCGTGTCCAT GCTGCGTGAT TTTCAGGGGG GGATGTTCGC CCAGCTGCCG
GACAAACTGG CCATGATGAA GGAGAGCCTG GAGGCTGCGC CGGTGGGAGA GGCGGATGTG
CCGGCCCAGT TGAAGCAACG CTTCGTGGGC ACAAGCGGCA AATTGCTACT GCAGGTGGCG
CCCAGGAAGG AGATCTTCGA GCACAAACCG CTGTCCGAAT TCGTCAGCCA GGTCAAGAGC
GTGGTTCCCA ACGCCACCGG CGAGCCGGTC ATGGTCTACG AATCACTGAC CGTGCTGCGC
GACTCCTACC TGCGGGCCTT TGCCTACGCC TTCATCGGCA TCGCCGTGAT CCTGCTGATC
AACTTCAAGA GCATCCGCTT CGCGCTGCTG GGCACCCTGC CGCTCGTGGC AGGCCTGCTG
CTGATGGTGG GGGGAATGTG GCTGGCGGGA GTCAGCTTCA ACTCGGCCAA TATCATCGTG
CTGCCACTGA TCCTTGGGGT GGGGATCGAC TCGGCCATCT ACATCATCAA CCGCTACCGC
CAGGGGAACG AGTCCCCGGC CCAGGTGGCG CTGAGCAGCG CCGGCATCGG CGTGTTCCTC
AACGCCCTGA CGATCCTGTT CAGTTTCGGC GCCCTGATGG TTGCCCACCA CCAGGGGGTA
TTCAGCATCG GCGCGGTCAT GTCCCTGGGC ATGGTTGCCA GCGTAGCTGT CTTCCTGGTC
TTCCTGCCCG CCCTGCTCTG CCTGTGGGGT AAACGGTAA
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| Protein sequence | MPHRSFHSRL FAFIARHPRL ILGVALLLSV ISVIYTKQNM EFLTGRDDLM PRNAAFQVDY
RAYRQEFGDQ EEVVIVVESD DAELSTRCAD AIYQRLSREK GVYRELFYPG GLPYFRKNGL
LFMPLEEIRN LRSTLTMAAP VLKDLAASPT VQTLFTSLTS QIDVYLATGD QDSLKSLTFM
LTTLDKGFKA FDGKSSGLSM DSFLKGSTDG KGSLLESAGK QQVITILPVK EQGSFVPAEK
AITTTRAILR QVMARPDFKG INAGLTGVPV LEYEEMATSQ HDIAIATVLS LSLTVVLLLF
AFRGLLNVIS AMVSLIVGIC LSFGFATAVI GHLNILSMVF AIMLIGLGIE YGIQVVLRYQ
EELRGGADGM QAIETGLGAN MRSIVMAAAT VALAFATFAF TDFKGIAELG IIAAGGVVIC
VLATFSVLPA MLILLERFRK PAKPYLAVPD GDREVQVAGR PLFRALLDRP RMVAGMTLLL
SLICVYPAID TRFDYNLMNL QAKGLQSVEY AYKLMRSKEN SGYFAVVMAK DRQEAQQLTR
RLEQLPSVDH VVSLDALVPD QQEAKLAELA ELKRVMDQVR PVPYEENLAL MELPMVFENF
HDRVAKLKQA LEKAGAAEAR PVAAFLTTLD GFFASLEKEK DRNAVSMLRD FQGGMFAQLP
DKLAMMKESL EAAPVGEADV PAQLKQRFVG TSGKLLLQVA PRKEIFEHKP LSEFVSQVKS
VVPNATGEPV MVYESLTVLR DSYLRAFAYA FIGIAVILLI NFKSIRFALL GTLPLVAGLL
LMVGGMWLAG VSFNSANIIV LPLILGVGID SAIYIINRYR QGNESPAQVA LSSAGIGVFL
NALTILFSFG ALMVAHHQGV FSIGAVMSLG MVASVAVFLV FLPALLCLWG KR
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