Gene Ppro_1484 details

Gene Information

• Locus tag: Ppro_1484
• ID: 4572316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1589888
• End bp: 1591699
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639755529
• Product: radical SAM domain-containing protein
• Protein accession: YP_901158
• Protein GI: 118579908
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism
• COG ID: [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component; [COG1180] Pyruvate-formate lyase-activating enzyme

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTGCG CCATATGTGA GAACCGATGC CTGATCCCGG AGAACGGGAC CGGCATCTGC 
GGCATGTACA CGGTTAACGA CGGTATCCAG ATGGAGAAGT ATCCCGACCA GTATCTGGTT 
GTGGTGCCGT CGGAAATCGA ATCCATGCCC ATGCTGCACT ACCACCCGGG CGGGACGTTC 
CTGCAACTCT GCACTGTCGG CTGCAACATG CGCTGCTGCG GTTGCGTCTC CTGGGTTATT 
ACCGAGAGCG TGGACGCAAT CCGGGGCGCG CTGCATTCCC TGACTCCTGA AGATGTGGTG 
GCCAGGGCGC TGGCCGAGGG GTGCCGGGGG ATCATGTTCT GCTTCAACGA ACCGGCAGTT 
TCCTTTCTTA CCTTCAAGAG GCTGGCGTCC CGCGCCCGGG AAGGGGGGCT CCTGGTGGGG 
TGCGCCAGCA ACGGCTGCTT CACCGAAGAG GCGTTCCGGG ACCTCTTGCG CCACATCGAC 
TTCATCAACA TCGGCATCAA GGGGTCGAGC GACGAGACCT ACGCCCTGCT GGGCGCCCGC 
TCCGCGGTCC CCGTCTTTAG AAACCTGCAA CTGAGCATTG AAAGTGGGGT GGCCACGGAA 
GTGGCGGCGG TGTACGTGAA GGGGCGTGAG GATGAACTGC GGGAGACGGC GCGGAGGGTG 
GCCTCGCTCT CGCCGGATAT CCCCTTTCAG CTCATGCGCT TCATCCCGCT GGCCATGGCG 
GACGGCTCCC AGGAACCCAC CGTGCGGGAG GCTGAGACGC TTTGCCGGGA AATCGGGGGG 
CTGCTCAGCT ACGTCTACCT GTTCAACTCT CCCGGCACGG AGCATCTGCA CACCCGCTGC 
CCGCGGTGTG GAGAGATCAT TGTGAGGCGG GGCTTCAACG GCCCCATGTG CGCCCATGTC 
ACCCATTGGC GGGAGGGGTA TGTGTGCTCC TGCGGTTTCA CTCCCCCCTT CAGCGGAAGT 
CCGGAGCGGG ACGGCGGCGC CCAGGTGCTG GGTTATTTCG GGGGGTACAA GACCATCATG 
GCCCTGGAGT CGGTCCAGAC CGTGCTGGCA TTCCTGGGGG AGCGGGAGCC GGCGGTGATC 
GCCTCGGTGC TGCAGCGCAT CCTGGAGTCG GGGTACATCA AGGGGCTGTA TGAGCGGGGC 
AAGCGGGTTG ACTCCTGGCT GGAGATTGTT GACCATTATG CGTTGATTGC CGGCAGGGAA 
GCGCAGGCCG GCGAACTGCG GGCGTTCATC CAGCACCATG TCTCTCTGGT GGCGGAAGGT 
GCCCGAGCAG TTACCCATCG TCCCAGGGTG TACTTCTCGC TGGGACACCC GCTGATCGCT 
GTTTTCGGGG ACAAGTTCGA GTGCAACCTG GTGGAACTGG CCGGTGGGCA CTGTGTCAAC 
GGCGAAATCC GGCGTGACGA AACCCCTGGC ATGACCATTG CCGCGGAAAC GCTGAACCGT 
CTCGATCCGG AAATCATGCT CAGCGTCGGC GCGCTTGGTT ATCCGCCGCA GGATTATCAT 
GCTGTCTGTC TGCAAGCGGG TCTGGATGTC AGGGCCGTTC GGCAGGGGAG GATTCACTCC 
CTGGCCCCCT ACAACGCGTC GGGCCGGCCG GACTGGATCC TGGGGTTTCT GCACATGGCC 
ACCATCATTC ATCCCGAGCT GTTCAGTTTT GATATGGAAA TGCTGGCCGA TGAGTTTTAC 
AGGAAGTTTC TGGGGATTTC CCCGGGACCG GACGGTCGGC GCAGGTCCAT CGCCCATCCG 
CGGGTTCTAA AGAGCCGGGT TGCGTTTCGT GAGAATGAGC CGCTTCCCGG TCTTCAGCTG 
ACGTCTGCGT GA 

 

Protein sequence

MQCAICENRC LIPENGTGIC GMYTVNDGIQ MEKYPDQYLV VVPSEIESMP MLHYHPGGTF 
LQLCTVGCNM RCCGCVSWVI TESVDAIRGA LHSLTPEDVV ARALAEGCRG IMFCFNEPAV 
SFLTFKRLAS RAREGGLLVG CASNGCFTEE AFRDLLRHID FINIGIKGSS DETYALLGAR 
SAVPVFRNLQ LSIESGVATE VAAVYVKGRE DELRETARRV ASLSPDIPFQ LMRFIPLAMA 
DGSQEPTVRE AETLCREIGG LLSYVYLFNS PGTEHLHTRC PRCGEIIVRR GFNGPMCAHV 
THWREGYVCS CGFTPPFSGS PERDGGAQVL GYFGGYKTIM ALESVQTVLA FLGEREPAVI 
ASVLQRILES GYIKGLYERG KRVDSWLEIV DHYALIAGRE AQAGELRAFI QHHVSLVAEG 
ARAVTHRPRV YFSLGHPLIA VFGDKFECNL VELAGGHCVN GEIRRDETPG MTIAAETLNR 
LDPEIMLSVG ALGYPPQDYH AVCLQAGLDV RAVRQGRIHS LAPYNASGRP DWILGFLHMA 
TIIHPELFSF DMEMLADEFY RKFLGISPGP DGRRRSIAHP RVLKSRVAFR ENEPLPGLQL 
TSA