Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1413 |
Symbol | |
ID | 4571982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1508159 |
End bp | 1510579 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639755457 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_901087 |
Protein GI | 118579837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0607109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCAT TTCTCGAGGC GATCCAGGAG AGGGTGCTGA TTCTGGACGG GGCCATGGGT ACCATGCTTC AGGAGCGGGG GCTTCGGCCG GGCCAGTCTC CCGAAGAACT CAACCTGACC ATGCCCGATG TGGTGGCGTC GGTCCACCGT GAGTATATCG AGGCTGGCGC CGACATCATC ATCACCAACA GCTTCGGCGG ATCGCGCTTC AAGCTGGCCC ACTTTGGGCT GGAAGGGCGC CTGGCCGAGA TCAACGCCCG CGCCGTGGAG ATTGCCCGTG GCGAGGCGCG GGGCAGGGCC TATGTGGGCG GCTCCATGGG TCCCACCGGT CAGTTCGTGG AGCCCTTGGG TGAGGTTTCC TTCGACCGTA TGAAAGAATC CTTCCGTGAG CAGGCCGAGG CGCTGGTCTC GGCCGGGGTC GATCTGATCA GCCTGGAGAC CTTCCTGGAC ATCAAGGAGT GCCGCGCAGC GGTGATCGCC ATCCGCGAGG TCTCGCCGAC CATCCCGATC ATCGCCATGA TGACTTTCGA TGACAACGGC CGTTCCGTAT TGGGAACGCC GCCCGAGGCC GCCGCCATCA CCCTGGCCGC TGCTGGCGTC GATATCGTCG GCTCCAACTG CGGGCTGGGG GTGGAGGGGA TCCACGACAT CCTGGTGCGC ATGCGCCGGG TGACCTCCCT GCCGCTCATC TCCCAGGCCA ACGCGGGGCT GCCGATCCTG AAAGACGGAA TCACCGTCTT CCCCGGAACC CCACGGGAGA TGACCGACTA CCACGACCGG CTGATCAGCC TGGGGGTGCG GGTGATCGGC GGCTGCTGCG GCACCACGCC GGCACATATC AGGGCCATGA AGGAGGCCCT TGCCGGCCGC CAGCAGGTTT GGCAGGAACC GACTCACCTG GAAGGAATGA CCCTGCTCTC CTGCCGGGGC GGGTGGACCG CCGTGGGGCC CGGCCAGAAG ACCGCCATCA TCGGCGAACG TATCAACCCC ACCGGCAAGA AGCTCTACTC CAAGGAACTG CAGGAGGGAA AGGTCTCCTA CATCCGCCGC GAGGCCATGG AGCAGGCGCA GTTGGGGGCC ACGTTGCTGG ACCTGAACGT GGGGGCGCCG GGGATCGACG AGCCGGTTGC CATGGAGCGG GCCGTGTTCT GCGCCAGCGG GGCAGTCGGC GTGCCGCTGG TGCTGGATTC CTCCAGCCCT GCCGCCCTGG AGGCGGGGCT CAAGGCGGCC GACGGCAAGG TGCTGATCAA CTCCGTCTCC GGCGAGGCCA AGAGCCTCTC CCGGGTGCTG CCACTGGCCA AGAAGTACGG TGCAGCCCTG ATCGGCCTGA CCCTGGATGC CAAGGGGATA CCGGACAGCG CCGAGGGGAG GCTGGCCATC GCCCGCAGGA TCCGCAACGC CGCCCGGCGG CAGGGGATTC CTGACCAGGA CATCATCATC GACTGCCTGA CCCTGACGGT CAGCGCCGAG CAGAAACGGG CGGCCGAGAC CCTGCGCACC ATCCGTCTGG TCAAGGAGAA GCTGGGGCTC TCCACGGTGC TGGGGGTCAG CAACATCTCT TTTGGCCTGC CCCAGCGGCC GCTGATCTCG TCCTCGTTCT TCTCCATGGC CATGGCCGCC GGTCTGGATG CGGCCATCAT CAACCCAAGG GAAAAGGCCA TGATGGATGC CTGGCGTTCG GCCATGGTGC TGCTCAACCG CGACCCACGG GCCGAAGCAT TCATCCAGAC CTATCGGGAC GAACAGGCGG TTGCCACGCC CGCCGCCCCT GTTTCGGACG CGCCCCAGGA GATCCGGCAG CGGCTGGGCC AGGCGGTGAT CAACGGCGAC AGGGACGGCA TCATCGGGCT GGTGGAAGAG GCTCTGGCCC AGGGGCTGGC CCCGCTGCAG ATCAGCAACG AAGGATTCCT CCCCGGCCTG GAGGAGGTGG GGCGGCGTTT CGAGAAGAAC ATCTTCTTCC TCCCCCAGGT GATGCAGTCG GCCGATACCA TGCACGCCGG TTTCGCCCGC CTCAAGGAGG AGATGAAGGG GCAGCCTCTG GAGAGCCGCG GCCGAATCCT GATGGCCACC GTGGAGGGGG ACATCCACGA TATCGGCAAG AACATCGTCT GCACCCTGCT GGAGAATCAC GGCTTTGAGG TGTTCGACAT CGGCAAGAAC GTGTCTGCCG CCACCATCGT CGCCAAGGCC AGGGAGTTCG GGGTGGATGC TGTGGGTCTC TCGGCGCTGA TGACCACCAC CATGGCCGAG ATGGACACGG TCCTCAAGAA GCTCAAGGCG GTGGGGATCA AGGCATTCAC CATGATCGGC GGAGCTGTGG TGACCCAGGA GTACGCCGAC CGCATCGGCG CCGATATCTA CGCCCGTGAC GCCATGGAGG CGGTGGCCAA GGTCAAGAAA CTGCTCCAGA TAGCCGATTA G
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Protein sequence | MTPFLEAIQE RVLILDGAMG TMLQERGLRP GQSPEELNLT MPDVVASVHR EYIEAGADII ITNSFGGSRF KLAHFGLEGR LAEINARAVE IARGEARGRA YVGGSMGPTG QFVEPLGEVS FDRMKESFRE QAEALVSAGV DLISLETFLD IKECRAAVIA IREVSPTIPI IAMMTFDDNG RSVLGTPPEA AAITLAAAGV DIVGSNCGLG VEGIHDILVR MRRVTSLPLI SQANAGLPIL KDGITVFPGT PREMTDYHDR LISLGVRVIG GCCGTTPAHI RAMKEALAGR QQVWQEPTHL EGMTLLSCRG GWTAVGPGQK TAIIGERINP TGKKLYSKEL QEGKVSYIRR EAMEQAQLGA TLLDLNVGAP GIDEPVAMER AVFCASGAVG VPLVLDSSSP AALEAGLKAA DGKVLINSVS GEAKSLSRVL PLAKKYGAAL IGLTLDAKGI PDSAEGRLAI ARRIRNAARR QGIPDQDIII DCLTLTVSAE QKRAAETLRT IRLVKEKLGL STVLGVSNIS FGLPQRPLIS SSFFSMAMAA GLDAAIINPR EKAMMDAWRS AMVLLNRDPR AEAFIQTYRD EQAVATPAAP VSDAPQEIRQ RLGQAVINGD RDGIIGLVEE ALAQGLAPLQ ISNEGFLPGL EEVGRRFEKN IFFLPQVMQS ADTMHAGFAR LKEEMKGQPL ESRGRILMAT VEGDIHDIGK NIVCTLLENH GFEVFDIGKN VSAATIVAKA REFGVDAVGL SALMTTTMAE MDTVLKKLKA VGIKAFTMIG GAVVTQEYAD RIGADIYARD AMEAVAKVKK LLQIAD
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