Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1398 |
Symbol | |
ID | 4573614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1491956 |
End bp | 1492588 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639755442 |
Product | hypothetical protein |
Protein accession | YP_901072 |
Protein GI | 118579822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000123271 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTCCC TCACCCACCA TTATCCGCAC CAACGGCATC CGCATGGCCG TGTACCAAGA GGGGGCGGCT TTCCGCTGGT GCTCTGCCAC GGCTTCCCCG AGCTGGCCTT CTCATGGCGT CACCAACTCC CGGCCTTGGC CCGTGCGGGG TTTTGGGCCA TCGCCCCTGA CCAGCGCGGC TACGGAAGGA GCGACAAACC GGCTGCCGTG GAGGAGTACG ACCGAATAGA CTCGGTTGAA AAATTCCCGA TGCCCCTGGT AGACCTCCAG CAGCTCGCCA ACGGTCATGT CGGCAACCGA CCGCTCCACG ACCCGGCGCA CCAGGCCATC CAGGAAGAGC CCGTTGCTCT CAGCGATGCC GCCCAGTGCT ATGATCTCCA GCAGGCTGTC AATGGTGGTC CTGGTGTGCC CTCCTGTTTT AGTCGCTTTT TTGATTTCTT TCGCTCGTGG CCTTCCAGTG CGGCGTTGAC CCTGGCCACA TACGAGTCCG GCGGAGCGGG TAAATTAGGG CGCTGCTCTG CTCTCAGCGC TTCCCGTACC GCTTCAGTGA TGAGCCGCTT CAAGTCGGCT ATGTCGATCG TGACGGCGGG CATGATTATA TGTTGTAGGT CCTCGGCCGA ACCATGTTGG TGA
|
Protein sequence | MRSLTHHYPH QRHPHGRVPR GGGFPLVLCH GFPELAFSWR HQLPALARAG FWAIAPDQRG YGRSDKPAAV EEYDRIDSVE KFPMPLVDLQ QLANGHVGNR PLHDPAHQAI QEEPVALSDA AQCYDLQQAV NGGPGVPSCF SRFFDFFRSW PSSAALTLAT YESGGAGKLG RCSALSASRT ASVMSRFKSA MSIVTAGMII CCRSSAEPCW
|
| |