Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0565 |
Symbol | |
ID | 4572468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 600527 |
End bp | 601447 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639754602 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_900254 |
Protein GI | 118579004 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.789528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCA AGAAAACAAT CAACGACGAA GTCTCCGGCC GGCGGCTGGA CGAGGCGCTT TCCCTGCTCT GCGACCAGGT CAGCAAGTCC GAGGCGCGGC GGATCATCGA CCGGGGCGGC TGCAACCTGA ACGGCAGCAT GGTGCGGGTT GCCTCACGGA TGGTGAGAAG CGGCGATACC ATCGACGTCG GCGTCATGGA ACCGGGCCGC TTCCGCGACC TTGTGCTGCC GCAGGAGGCG CTGCTCCATG AGGATGACGA CCTGATCGCC CTGAACAAGC CGGCCGGTGT CAACACCCAG CGTACCCCCT ATCAGCTCAA GGGAACCCTG GAGTACTGGG CAAGCGAGTA CTTCCGCCGG CAGGGGAACC CCGAACCGGC CCGGGTGATC CACCGCCTGG ACCGCGGCAC CTCAGGGGTG ATGCTCTTTC CCAAACACAA GCGGGCAGCT GCCTGGCTGT CGAAGCGCTT CCACGACGGC CAGGTGGAGA AGCGCTATCT GGCCCTGGTG AGTGGCACGC CGGGCCAGAT CGAGTGGAGG GTGGACGGCC CCATCGGCAA GATCGCCAGT GCCCGTTACG GCATCGTTGC CGGAGGGCGT TCGGCCCTGA CCGAGTTCCG CCTGCTGGCC GAGTCTTGCG GATATGCCCT GGTTGAGGCC AAGCCGCTCA CCGGCCGCAC CCACCAGATC CGTGTGCATC TGCAGTCGTG CGGCCTGCCC ATCGTGGGGG ACGGGACCTA TGGCGGCGAG CCTGCTGCGC GCATGATGCT GCACTGCGCA TCCCTGCGCT TCGCGGATGG CGGGGGGAGA GAGATCGTCG TCGAGGCGCC GCTGGATAGG GACTTCAGGG GACTCATGGA AGAAAGGGGG GTGGCCATGA CGGCCCCGGG GTTGCTGAAC GGCACGGTCC CGGTTCCTTG A
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Protein sequence | MIIKKTINDE VSGRRLDEAL SLLCDQVSKS EARRIIDRGG CNLNGSMVRV ASRMVRSGDT IDVGVMEPGR FRDLVLPQEA LLHEDDDLIA LNKPAGVNTQ RTPYQLKGTL EYWASEYFRR QGNPEPARVI HRLDRGTSGV MLFPKHKRAA AWLSKRFHDG QVEKRYLALV SGTPGQIEWR VDGPIGKIAS ARYGIVAGGR SALTEFRLLA ESCGYALVEA KPLTGRTHQI RVHLQSCGLP IVGDGTYGGE PAARMMLHCA SLRFADGGGR EIVVEAPLDR DFRGLMEERG VAMTAPGLLN GTVPVP
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