Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0427 |
Symbol | |
ID | 4573006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 448289 |
End bp | 449332 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639754466 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_900118 |
Protein GI | 118578868 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.273579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAA AAACCGACCT GAAAAACCTG ACCCTGCCTG CTCTGGAGCA GTTTCTGCGG GGGCAGGGCA AGGAGCGCTT CCGCGCCACC CAGGTCTTCA AATGGATCTA CCAGCACGAT GCCCGCAGCT TCCAGGAGAT GACCAACATA TCCAAGGATC TGCGGGCGGA GCTGGAGGCG AAGGCGTACA TCAGCAACCT GGAGCCGGAG GCCGTTGAGG TGGGCGGCGA CGGTACGCGC AAGTACCTGT TCGGCCTGGA AGACGGCAAT TCGGTGGAGT CGGTGCTCAT ACCGGACGAG GGGCGCAACA CCCTCTGCAT CTCCTCCCAG GTGGGGTGCG CCATGGGGTG CGCGTTCTGT CTCACCGGGA CGTTCAGGCT GACCCGCAAC CTGACCACGG CCGAGATCGT CAACCAGATC ATGGCCGTGC GGCGCGATGT GGAGATACGC AACATCGTCA TGATGGGCAT GGGGGAGCCG CTGCACAACC TGGATAACGT CATCCCGGCC ATCCACATCA TGATCGACGG TAATGGCCTG CAGCTCTCCA ACCGCCGAGT CACGGTCTCC ACCTGCGGAC TGGCGCCGGA GATGGAGCGA CTTGGCCGGG AGTTGCCCAA CGTCAATCTG GCCGTATCGC TGAACGCCAC CACCGACGAA CTGCGCGACC GGATCATGCC GATCAACCGC CGCTATCCGC TGAAGGAGCT GCTCAGCGCC TGCCGGGAGT TCCCGCTTCC CGGACGCCGC AAGGTCACCT TCGAATACGT CATGCTGGGG GGGCTGAACG ACACGCTGGA GGATGCCAAG CGGCTGTTGC GCCTGACTAG CGATATCCCC AACAAGGTCA ACCTGATTCC CTTTAACGAG TTCCAGGGGT GTGAATTCCG CTCTCCCACC CGGGCGGCCA TCGATGCCTT TCACAAATAC CTGATCGACC GCCATGTGAC GGTGATTACC CGCGACAGCC GCGGCAGTGA CATCTCCGCT GCCTGCGGCC AGTTGAAGGG AAAGCTTGAC GCGGCTAGAC AGCCGACGGA ATAG
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Protein sequence | MTEKTDLKNL TLPALEQFLR GQGKERFRAT QVFKWIYQHD ARSFQEMTNI SKDLRAELEA KAYISNLEPE AVEVGGDGTR KYLFGLEDGN SVESVLIPDE GRNTLCISSQ VGCAMGCAFC LTGTFRLTRN LTTAEIVNQI MAVRRDVEIR NIVMMGMGEP LHNLDNVIPA IHIMIDGNGL QLSNRRVTVS TCGLAPEMER LGRELPNVNL AVSLNATTDE LRDRIMPINR RYPLKELLSA CREFPLPGRR KVTFEYVMLG GLNDTLEDAK RLLRLTSDIP NKVNLIPFNE FQGCEFRSPT RAAIDAFHKY LIDRHVTVIT RDSRGSDISA ACGQLKGKLD AARQPTE
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