Gene Ppro_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0292 
Symbol 
ID4574885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp288933 
End bp289559 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID639754329 
ProductAllergen V5/Tpx-1 family protein 
Protein accessionYP_899984 
Protein GI118578734 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA CTTTCGCATT CATACTCACG CTTATCTGCC TGGCCCTGCT ACCGGTCAGC 
CGGGCGGACG CTTCGCCAGC CTGCTTTGCC GGCAAGATCC TGGAAGAGAT CAACCTTGCC 
CGCAGCCAGC CCCACAGATA CGCCGACTAT CTGCGTCACC TGCGCAACGT CTCCGAGGGA 
ACGGCATACA ATGTTCCCGG CAGCCCCCTC CCCATACAGA CCAGGGAGGG AACTGATGCC 
GTGGACGAGG CGATCCGCTT TCTTGAGCGC CAGAAACCGC TGCCCGCGCT CTCCTGGTCT 
CCGGGGCTGG CTGCCGCCGC CATTGAACTC GCCCGCGAGC AGAGCGAAAC CGGCGGCACC 
GGCCATGCGG GCACCAGCGG CGGCGTGCGC GAACGCATCG CCCGCCAGGG CAGGTGGAAG 
GGACGCATCG GCGAGAACAT CGCCTACGGC CCGGGCAACC CGCGCGGTAT GGTCATGCAA 
CTGATCATCA ACGACGGCGT CCCGGAACGC GGGCACCGCA GGAACATCTT CCGCCGCTCC 
TTCGCCGTGA GCGGCATCGC CTGCGCCCCC CATCCCCATT ACGGCGGCCT GTGCGTGATG 
GATTTCGCCG ACAGATTCCT GGACTGA
 
Protein sequence
MNRTFAFILT LICLALLPVS RADASPACFA GKILEEINLA RSQPHRYADY LRHLRNVSEG 
TAYNVPGSPL PIQTREGTDA VDEAIRFLER QKPLPALSWS PGLAAAAIEL AREQSETGGT 
GHAGTSGGVR ERIARQGRWK GRIGENIAYG PGNPRGMVMQ LIINDGVPER GHRRNIFRRS 
FAVSGIACAP HPHYGGLCVM DFADRFLD