| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2881 |
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| Symbol | |
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| ID | 6461694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2966001 |
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| End bp | 2966897 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642729026 |
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| Product | putative lipoprotein |
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| Protein accession | YP_002019641 |
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| Protein GI | 194337847 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000449553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGTTA ACAGATTTAT TTCACGTTCA GCGCTGATGC TTTTGGCGAC AGGGTTACTG
ATGAGTTCCG GTTGTTCATC CTCAAAACCG GCAAAGATCT CAGCAACCAC TCGCGTTAAC
GAAGCCTATG GCAAAGCGGT GAAGATGTAC GATAAAAGAG ATTATCAGGG AGCCGCTCTC
GGGCTTGAAT CGCTGCTGTT TACCTCCAGG GCAACAGCGC TTGAGGATGA TGTGCTCTTT
CTTCTGGCCC AATCCTATTA CCATTCCGGA CAGTATCTGC TTGCTGCTGA AATGTTTACC
AAGTTGCAGC AGCAAATATC CTCAACACCC TATGCAAGAA CAGCCCAGTT TATGCTTGCC
AAATCCTATG AACAGCTCTC TCCGCATTTT GAACTCGATC AGGAACATAC CGCGAAAGCC
ATCACGCAGT TTGCAACCTA TCTCGATCTC TATCCGATGG TTGATTCCTC GAAGATTGCC
AGCGATGTCA CAACATACCG TGAGCTGCTG AAAATCAATC CGGATAATGC CTCCTATAAG
CAGAGCTATG CAACGGCAAC CACTCAATTT GCCCGGATTG ATACTTTGCG GTATGCAGAA
AAGGCAATTC CTGTGCTGAG AGAAAAACTG GCAAAGAACA CTTTTTTTAT TGCTCGCCAG
TATGTTCAGC TTAAAAAGTA TAAAGCGGCA GGTATTTTTT ATGACGAACT CATCAAGCGT
TATCCGGATA CCGTCTATAT CAAGCCAGCC TGGGAAGGAA AGATTGATGT CTTGATGAAG
CGAAAAAAAT GGTTTGATGC CAGCCAGGCA CTTGATCAGT ACCTGCAGAA TTTCCCTGAT
AAGCAGAAGG ATATGGAGGA TAACAGGGAT AAAATCAAGC AAAACACTAA AAGCTGA
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| Protein sequence | MSVNRFISRS ALMLLATGLL MSSGCSSSKP AKISATTRVN EAYGKAVKMY DKRDYQGAAL
GLESLLFTSR ATALEDDVLF LLAQSYYHSG QYLLAAEMFT KLQQQISSTP YARTAQFMLA
KSYEQLSPHF ELDQEHTAKA ITQFATYLDL YPMVDSSKIA SDVTTYRELL KINPDNASYK
QSYATATTQF ARIDTLRYAE KAIPVLREKL AKNTFFIARQ YVQLKKYKAA GIFYDELIKR
YPDTVYIKPA WEGKIDVLMK RKKWFDASQA LDQYLQNFPD KQKDMEDNRD KIKQNTKS
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