| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2776 |
|---|
| Symbol | |
|---|
| ID | 6462392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2868171 |
|---|
| End bp | 2868968 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642728929 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_002019544 |
|---|
| Protein GI | 194337750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1138] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.638359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATCA ACTTTAACAC TGCAGCAATA GCGGCAATTG CCTGCTGGGC TCTTGGCTCC
CTGCTGAGCC TTCTGGCCCG CCGTACTCCA GCCCTGAAAA TTCCGGCATT TATCATCTCT
TTTTCAGGAG CGCTGGTCAT GGTGGCTTTT ATTGCCTTTT ACTGGTCGCT CCTCGACCGT
CCACCACTCC GAACCCTTGG CGAAACGCGT CTTTGGTATG CGGCGCTCAT TCCTCTTGTC
GGCTTTCTGG TCGAGTACCG CTGGAAGATT GAGTGGCTGA AATACTACTG CATGGGACTT
GCGACATTTT TTCTTGTCAT CAACATGCTC CATCCCGAAG TCTTTGATAA AACCCTGATG
CCCGCACTGC AGAGCCCCTG GTTTATTCCG CATGTCATTG TCTATCTGGT CGGCTATGTA
CTGCTTGCCG CATCTTCAGT TACCGCGCTT CATAACGTCT CTCTCCAGAT ACGACACAAA
GAGAATACGA ACGGTGAATC CGTCTCGCAC TATCTGGCTC TGCTTGGTTT TGTGCTGCTC
TCCTTCGGCC TGATTTTTGG TGCTCTTTGG GCAAAAGAGG CATGGGGCCA TTACTGGACC
TGGGATCCAA AAGAGACCTG GGCATTCCTC TCCTGGCTGG CCTATCTCGG TTATCTTCAC
GCCTTCAGCT ACAAGATTGA CCGCAGCAAG CTGCAATGGT ATCTCGCACT TTCGTTTGTC
GTGCTTCTGG TCTGCTGGTT CGGCGTCAAC TATCTACCAT CCTCACAAAA CAGCGTCCAC
ACCTACACGC AAAGCTGA
|
|---|
| Protein sequence | MIINFNTAAI AAIACWALGS LLSLLARRTP ALKIPAFIIS FSGALVMVAF IAFYWSLLDR
PPLRTLGETR LWYAALIPLV GFLVEYRWKI EWLKYYCMGL ATFFLVINML HPEVFDKTLM
PALQSPWFIP HVIVYLVGYV LLAASSVTAL HNVSLQIRHK ENTNGESVSH YLALLGFVLL
SFGLIFGALW AKEAWGHYWT WDPKETWAFL SWLAYLGYLH AFSYKIDRSK LQWYLALSFV
VLLVCWFGVN YLPSSQNSVH TYTQS
|
|---|
| |